RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 TNIP2Q8NFZ5 429 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 ZNF670Q9BS34 389 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 COL20A1Q9P218 1284 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 ANKRD6Q9Y2G4 727 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 TBX10O75333 385 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 TGFB3P10600 412 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 CETPP11597 493 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 VAV1P15498 845 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 INPP1P49441 399 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 ADIGQ0VDE8 80 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 MPP2Q14168 576 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 HPS6Q86YV9 775 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 FBXW8Q8N3Y1 598 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 CD101Q93033 1021 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 MRPS26Q9BYN8 205 aaKnown RBP15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 APOBEC3GQ9HC16 384 aaKnown RBP15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 AP4B1Q9Y6B7 739 aa15.36■□□□□ 0.05
ARHGEF40-207ENST00000556399 MAN1A2O60476 641 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 CYP2C9P11712 490 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 NPY2RP49146 381 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 FAM81AQ8TBF8 368 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 URGCPQ8TCY9 931 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 CELF6Q96J87 481 aaKnown RBP15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 ARHGAP28Q9P2N2 729 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 NFASCO94856 1347 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 C15orf38-AP3S2A0A0A6YYH1 394 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 TNPO2O14787 897 aaKnown RBP15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 UBA1P22314 1058 aaKnown RBP15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 FASP25445 335 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 DGKZQ13574 1117 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 NFYCQ13952 458 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 ARPINQ7Z6K5 226 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 PAIP1Q9H074 479 aaKnown RBP15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 RIC8BQ9NVN3 520 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 VAPBO95292 243 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 F9P00740 461 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 CD151P48509 253 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 MAP3K7CLP57077 242 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 CXCL9Q07325 125 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 SPATA2LQ8IUW3 424 aaPredicted RBP15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 C17orf80Q9BSJ5 609 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 CCDC28BQ9BUN5 200 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 NDFIP2Q9NV92 336 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 GPRC5DQ9NZD1 345 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 CD274Q9NZQ7 290 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 CAPN8A6NHC0 703 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 CSPG5O95196 566 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 DPEP1P16444 411 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 SLC18A1P54219 525 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 FBXO47Q5MNV8 452 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 TSPAN14Q8NG11 270 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 RCN3Q96D15 328 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 EIF2AQ9BY44 585 aaKnown RBP15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 GPR88Q9GZN0 384 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 LHX5Q9H2C1 402 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 MORF4L1Q9UBU8 362 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 FETUBQ9UGM5 382 aa15.35■□□□□ 0.05
ARHGEF40-207ENST00000556399 LGR5O75473 907 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 INSRRP14616 1297 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 PCSK1P29120 753 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 EPHA3P29320 983 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 TKTL1P51854 596 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 NR1H2P55055 460 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 SPOUT1Q5T280 376 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 FKBP1CQ5VVH2 108 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 PQLC1Q8N2U9 271 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 GLIS1Q8NBF1 620 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 AKT1S1Q96B36 256 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 SNTG2Q9NY99 539 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 CDH22Q9UJ99 828 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 DYNC1LI2O43237 492 aaPredicted RBP15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 RHOBTB1O94844 696 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 ETFBP38117 255 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 FASTKD5Q7L8L6 764 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 XYLT1Q86Y38 959 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 FAM162AQ96A26 154 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 DGCR14Q96DF8 476 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 ZMAT2Q96NC0 199 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 PCDH18Q9HCL0 1135 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 SNX15Q9NRS6 342 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 HDAC3O15379 428 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 TMEM63AO94886 807 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 RPS12P25398 132 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 CMC1Q7Z7K0 106 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 PLD3Q8IV08 490 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 TMCO5AQ8N6Q1 288 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 TERB1Q8NA31 727 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 RP9Q8TA86 221 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 C7orf43Q8WVR3 580 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 FAM136AQ96C01 138 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 LGMNQ99538 433 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 ADAM28Q9UKQ2 775 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 TMEM114B3SHH9 223 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 SIN3BO75182 1162 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 CCDC130P13994 396 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 GRIA4P48058 902 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 SAMD4BQ5PRF9 694 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 EFL1Q7Z2Z2 1120 aaKnown RBP15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 GALNT15Q8N3T1 639 aa15.34■□□□□ 0.05
ARHGEF40-207ENST00000556399 LENG1Q96BZ8 264 aaPredicted RBP15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms