RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 Q6ZNB5 142 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 SYDE1Q6ZW31 735 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-218ENST00000556343 CHST9Q7L1S5 443 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 GSTA5Q7RTV2 222 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 C14orf80Q86SX3 495 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 CDKL3Q8IVW4 592 aaPredicted RBP9.49□□□□□ -0.89
ACTN1-218ENST00000556343 NPAS3Q8IXF0 933 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 CCDC105Q8IYK2 499 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 PLD5Q8N7P1 536 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 RTL3Q8N8U3 475 aaKnown RBP9.49□□□□□ -0.89
ACTN1-218ENST00000556343 ATL2Q8NHH9 583 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 CCHCR1Q8TD31 782 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 BPIFB1Q8TDL5 484 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 DDI1Q8WTU0 396 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 NSMCE1Q8WV22 266 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 MYLIPQ8WY64 445 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 HLA-CQ95604 372 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 MSLNLQ96KJ4 702 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 ZFRQ96KR1 1074 aaKnown RBP9.49□□□□□ -0.89
ACTN1-218ENST00000556343 ASB16Q96NS5 453 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 PRMT1Q99873 361 aaKnown RBP9.49□□□□□ -0.89
ACTN1-218ENST00000556343 AP1M1Q9BXS5 423 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 LRRC19Q9H756 370 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 TRPV4Q9HBA0 871 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 ANLNQ9NQW6 1124 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 ARHGEF4Q9NR80 690 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 TMPRSS4Q9NRS4 437 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 HAUS2Q9NVX0 235 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 ZNF148Q9UQR1 794 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 HEY1Q9Y5J3 304 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 SNX10Q9Y5X0 201 aa9.49□□□□□ -0.89
ACTN1-218ENST00000556343 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 GOLGA6L7A0A1B0GV03 622 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 A0A1B0GVM2 712 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 TCAF2A6NFQ2 919 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 ARHGAP42A6NI28 874 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 FAM72CH0Y354 149 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 H0Y626 953 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 NDC80O14777 642 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 DCLK1O15075 740 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 MTSS1O43312 755 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 TBL1XO60907 577 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 TBX10O75333 385 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 GAS8O95995 478 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 KLKB1P03952 638 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 OR1E1P30953 314 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 STIP1P31948 543 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 LTBRP36941 435 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 COILP38432 576 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 YBEYP58557 167 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 EIF3EP60228 445 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 USP4Q13107 963 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 SMAD4Q13485 552 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 BYSLQ13895 437 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 DHX34Q14147 1143 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 PDGFRLQ15198 375 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 ZNF77Q15935 545 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 CYP1B1Q16678 543 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 FAM78AQ5JUQ0 283 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 FAM72AQ5TYM5 149 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 NADSYN1Q6IA69 706 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 FAM72DQ6L9T8 149 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 DARS2Q6PI48 645 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 CCDC137Q6PK04 289 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 C4orf22Q6V702 233 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 ZNF783Q6ZMS7 281 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 SETD3Q86TU7 594 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 FAM72BQ86X60 149 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 ZNF354CQ86Y25 554 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 KLHL7Q8IXQ5 586 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 FAM217AQ8IXS0 508 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 PLCD3Q8N3E9 789 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 MMGT1Q8N4V1 131 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 PQLC3Q8N755 202 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 C12orf50Q8NA57 414 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 TDRD5Q8NAT2 981 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 SMRP1Q8NCR6 262 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 ACTL9Q8TC94 416 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 DEPDC1BQ8WUY9 529 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 TFB1MQ8WVM0 346 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 RSAD2Q8WXG1 361 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 UBXN4Q92575 508 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 ZSWIM3Q96MP5 696 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 KRT12Q99456 494 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 SMG9Q9H0W8 520 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 UBE2ZQ9H832 354 aaPredicted RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 TMEM248Q9NWD8 314 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 DUS2Q9NX74 493 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 XPO7Q9UIA9 1087 aaKnown RBP9.48□□□□□ -0.89
ACTN1-218ENST00000556343 HPCAL4Q9UM19 191 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 NR2E1Q9Y466 385 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 GREB1Q4ZG55 1949 aa9.48□□□□□ -0.89
ACTN1-218ENST00000556343 TRANK1O15050 2925 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 ZNF638Q14966 1978 aaKnown RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 FAM187AA6NFU0 413 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 HEPACAM2A8MVW5 462 aa9.47□□□□□ -0.89
ACTN1-218ENST00000556343 I6L893 689 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 PDE2AO00408 941 aaPredicted RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 RIOK3O14730 519 aaKnown RBP9.47□□□□□ -0.89
ACTN1-218ENST00000556343 TSPAN3O60637 253 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms