RNA–Protein interactions for RNA: ENST00000556268.1

GTF2A1-204, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 5

Gene GTF2A1, Length 864 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-204ENST00000556268 ADGRF1Q5T601 910 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 CC2D1AQ6P1N0 951 aaPredicted RBP9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 FAM171BQ6P995 826 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 ABCA7Q8IZY2 2146 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 TMEM86AQ8N2M4 240 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 PDCL2Q8N4E4 241 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 KIAA1958Q8N8K9 716 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 TMEM52Q8NDY8 209 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 CD101Q93033 1021 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 EXOC4Q96A65 974 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 HVCN1Q96D96 273 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 IKZF4Q9H2S9 585 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 SMOC1Q9H4F8 434 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 TMEM206Q9H813 350 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 CRTAC1Q9NQ79 661 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 UXTQ9UBK9 157 aaPredicted RBP9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 KIF3AQ9Y496 699 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 MYH11P35749 1972 aa9.57□□□□□ -0.88
GTF2A1-204ENST00000556268 K7EQS6 105 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 CDX4O14627 284 aaPredicted RBP9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 PFKLP17858 780 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 RPL10AP62906 217 aaKnown RBP9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 ZXDBP98169 803 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 TSPY1Q01534 308 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 DHX8Q14562 1220 aaKnown RBP9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 DMC1Q14565 340 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 MTF1Q14872 753 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 CFAP221Q4G0U5 840 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 SDHAF4Q5VUM1 108 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 GALNT18Q6P9A2 607 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 DPH6Q7L8W6 267 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 RASSF3Q86WH2 238 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 CILP2Q8IUL8 1156 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 ADGRG2Q8IZP9 1017 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 CPA6Q8N4T0 437 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 LRRC52Q8N7C0 313 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 NAT16Q8N8M0 369 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 ZSWIM2Q8NEG5 633 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 CCDC26Q8TAB7 109 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 USP33Q8TEY7 942 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 POMGNT1Q8WZA1 660 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 DNAJC19Q96DA6 116 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 FUBP3Q96I24 572 aaKnown RBP eCLIP9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 CEP295NLQ96MC4 621 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 PI4K2AQ9BTU6 479 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 DUS2Q9NX74 493 aaKnown RBP9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 DDX43Q9NXZ2 648 aaKnown RBP9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 GTF3C4Q9UKN8 822 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 L1RE1Q9UN81 338 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 AGAP1Q9UPQ3 857 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 FRYQ5TBA9 3013 aa9.56□□□□□ -0.88
GTF2A1-204ENST00000556268 KIF26AQ9ULI4 1882 aaPredicted RBP9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 PCNX2A6NKB5 2137 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 DENND4CQ5VZ89 1909 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 MYOCOSA0A1B0GUC4 107 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 C4orf47A7E2U8 309 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 BMP15O95972 392 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 CD3EP07766 207 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 CEACAM1P13688 526 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 IFNGR1P15260 489 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 CSRP1P21291 193 aaKnown RBP9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 MAGEA11P43364 429 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 LHX1P48742 406 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 KARSQ15046 597 aaKnown RBP9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 ELF2Q15723 593 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 TCEAL6Q6IPX3 200 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 VHLLQ6RSH7 139 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 USP49Q70CQ1 688 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 C11orf74Q86VG3 221 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 OSTM1Q86WC4 334 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 CSGALNACT2Q8N6G5 542 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 RPLP0P6Q8NHW5 317 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 OLIG1Q8TAK6 271 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 CACTINQ8WUQ7 758 aaKnown RBP9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 LARP4BQ92615 738 aaKnown RBP9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 ATP2A3Q93084 1043 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 TCEAL3Q969E4 200 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 TMX3Q96JJ7 454 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 SPATA17Q96L03 361 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 ZNF560Q96MR9 790 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 JMJD8Q96S16 334 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 ZHX3Q9H4I2 956 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 ZNF552Q9H707 407 aaPredicted RBP9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 SEL1LQ9UBV2 794 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 SIX4Q9UIU6 781 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 ARHGAP26Q9UNA1 814 aa9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 MAGED2Q9UNF1 606 aaPredicted RBP9.55□□□□□ -0.88
GTF2A1-204ENST00000556268 ZZEF1O43149 2961 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 GON4LQ3T8J9 2241 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 ANK1P16157 1881 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 TRAV19A0A0A6YYK7 116 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 OR14I1A6ND48 311 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 MYMKA6NI61 221 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 H3BQV1 296 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 ETV2O00321 342 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 FGF10O15520 208 aaPredicted RBP9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 HUS1O60921 280 aa9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 TBCAO75347 108 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 LDHAP00338 332 aaKnown RBP9.54□□□□□ -0.88
GTF2A1-204ENST00000556268 ITGB3P05106 788 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms