RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 FZD4Q9ULV1 537 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 PCDHGC3Q9UN70 934 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 NAALADL1Q9UQQ1 740 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 APOBEC2Q9Y235 224 aaKnown RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 ZBTB32Q9Y2Y4 487 aaPredicted RBP8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 GTF3C3Q9Y5Q9 886 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 PCDH15Q96QU1 1955 aa8.07□□□□□ -1.12
PTCSC3-201ENST00000556013 ITIH6Q6UXX5 1313 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 GOLGA6L7A0A1B0GV03 622 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 SPAARA0A1B0GVQ0 90 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 KCNU1A8MYU2 1149 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 MSI1O43347 362 aaKnown RBP8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 DKK1O94907 266 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 LUC7L3O95232 432 aaKnown RBP8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 TRUB2O95900 331 aaKnown RBP8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 APOEP02649 317 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 CDK4P11802 303 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 HLA-EP13747 358 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 GNA15P30679 374 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 CD70P32970 193 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 ACSL1P33121 698 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 NUDT1P36639 197 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 RACK1P63244 317 aaKnown RBP8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 ECT2LQ008S8 904 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 HLA-BQ31612 363 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 DCAF6Q58WW2 860 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 CT47A1Q5JQC4 288 aaPredicted RBP8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 TTC39BQ5VTQ0 682 aaPredicted RBP8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 RFWD3Q6PCD5 774 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 GBP6Q6ZN66 633 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 ZDHHC17Q8IUH5 632 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 NAXDQ8IW45 347 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 ARHGEF19Q8IW93 802 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 ZCCHC9Q8N567 271 aaKnown RBP8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 MLKLQ8NB16 471 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 BAHD1Q8TBE0 780 aaPredicted RBP8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 CLEC4CQ8WTT0 213 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 CYB5D2Q8WUJ1 264 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 IGSF8Q969P0 613 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 FAM149B1Q96BN6 582 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 BIRC7Q96CA5 298 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 MRGPRX3Q96LB0 322 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 NOX5Q96PH1 765 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 MIS12Q9H081 205 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 INTS2Q9H0H0 1204 aaKnown RBP8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 MIR1-1HGQ9H1L0 117 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 KDM4CQ9H3R0 1056 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 ST7Q9NRC1 585 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 RRN3Q9NYV6 651 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 APEX2Q9UBZ4 518 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 TJP2Q9UDY2 1190 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 PCOLCE2Q9UKZ9 415 aa8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 INTS6Q9UL03 887 aaKnown RBP8.06□□□□□ -1.12
PTCSC3-201ENST00000556013 EDDM13A0A1B0GTR0 161 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 A0A1W2PPC4 97 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 LRRC72A6NJI9 287 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 E9PAM4 449 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 VILLO15195 856 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 HYAL3O43820 417 aaPredicted RBP8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 LETM1O95202 739 aaPredicted RBP8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 TOP3BO95985 862 aaKnown RBP8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 CAPNS1P04632 268 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 KRT5P13647 590 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 C5AR1P21730 350 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 CCR1P32246 355 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 CSKP41240 450 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 CCR5P51681 352 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 SGSHP51688 502 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 STX17P56962 302 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 BPIFB4P59827 614 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 UBE2HP62256 183 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 RPS24P62847 133 aaKnown RBP8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 FAM193AP78312 1265 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 CDK17Q00537 523 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 BNC1Q01954 994 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 PTK2Q05397 1052 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 CDH18Q13634 790 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 EXOC3L4Q17RC7 722 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 C5orf22Q49AR2 442 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 PITRM1Q5JRX3 1037 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 C9orf64Q5T6V5 341 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 SYPL2Q5VXT5 272 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 KIAA0895LQ68EN5 471 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 TRIM65Q6PJ69 517 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 CCNI2Q6ZMN8 369 aaPredicted RBP8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 SND1Q7KZF4 910 aaKnown RBP eCLIP8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 TMPRSS7Q7RTY8 843 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 CARNMT1Q8N4J0 409 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 CHCHD4Q8N4Q1 142 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 WDTC1Q8N5D0 677 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 C1orf131Q8NDD1 294 aaKnown RBP8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 ZNF397Q8NF99 534 aaPredicted RBP8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 OR2T34Q8NGX1 318 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 WFDC5Q8TCV5 224 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 RHBDD1Q8TEB9 315 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 SHC3Q92529 594 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 FAM131CQ96AQ9 280 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 PPP1R13BQ96KQ4 1090 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 SLC2A13Q96QE2 648 aa8.05□□□□□ -1.12
PTCSC3-201ENST00000556013 PRMT1Q99873 361 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms