RNA–Protein interactions for RNA: ENST00000555806.5

NEDD1-208, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-208ENST00000555806 PPM1JQ5JR12 505 aa19.04■□□□□ 0.64
NEDD1-208ENST00000555806 FAM102AQ5T9C2 384 aaPredicted RBP19.04■□□□□ 0.64
NEDD1-208ENST00000555806 METTL3Q86U44 580 aaKnown RBP19.04■□□□□ 0.64
NEDD1-208ENST00000555806 EPS8L1Q8TE68 723 aa19.04■□□□□ 0.64
NEDD1-208ENST00000555806 DDX1Q92499 740 aaKnown RBP19.04■□□□□ 0.64
NEDD1-208ENST00000555806 C18orf8Q96DM3 657 aa19.04■□□□□ 0.64
NEDD1-208ENST00000555806 TOE1Q96GM8 510 aaKnown RBP19.04■□□□□ 0.64
NEDD1-208ENST00000555806 LMLNQ96KR4 655 aa19.04■□□□□ 0.64
NEDD1-208ENST00000555806 SPAG5Q96R06 1193 aa19.04■□□□□ 0.64
NEDD1-208ENST00000555806 TMEM245Q9H330 911 aa19.04■□□□□ 0.64
NEDD1-208ENST00000555806 KIAA1522Q9P206 1035 aaPredicted RBP19.04■□□□□ 0.64
NEDD1-208ENST00000555806 USP36Q9P275 1121 aaKnown RBP19.04■□□□□ 0.64
NEDD1-208ENST00000555806 EVLQ9UI08 416 aaPredicted RBP19.04■□□□□ 0.64
NEDD1-208ENST00000555806 PILRBQ9UKJ0 227 aa19.04■□□□□ 0.64
NEDD1-208ENST00000555806 C4orf47A7E2U8 309 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 MOCS3O95396 460 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 LSM8O95777 96 aaKnown RBP19.03■□□□□ 0.64
NEDD1-208ENST00000555806 ASLP04424 464 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 CFIP05156 583 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 MATKP42679 507 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 SULT1E1P49888 294 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 TPMTP51580 245 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 TYRO3Q06418 890 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 CAMK2GQ13555 558 aaPredicted RBP19.03■□□□□ 0.64
NEDD1-208ENST00000555806 SYCP1Q15431 976 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 FSCBQ5H9T9 825 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 PITRM1Q5JRX3 1037 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 RABGAP1LQ5R372 815 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 MMS22LQ6ZRQ5 1243 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 CIR1Q86X95 450 aaPredicted RBP19.03■□□□□ 0.64
NEDD1-208ENST00000555806 SLC41A1Q8IVJ1 513 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 RGL4Q8IZJ4 473 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 TMEM9BQ9NQ34 198 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 ITM2CQ9NQX7 267 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 RRN3Q9NYV6 651 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.03■□□□□ 0.64
NEDD1-208ENST00000555806 LIMA1Q9UHB6 759 aaKnown RBP19.03■□□□□ 0.64
NEDD1-208ENST00000555806 INTS6Q9UL03 887 aaKnown RBP19.03■□□□□ 0.64
NEDD1-208ENST00000555806 STAP1Q9ULZ2 295 aa19.03■□□□□ 0.64
NEDD1-208ENST00000555806 LGALS16A8MUM7 142 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 GOLGA8SH3BPF8 625 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 EPHB6O15197 1021 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 OXTRP30559 389 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 HOXD12P35452 270 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 SOX5P35711 763 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 GABRB2P47870 512 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 UBXN1Q04323 297 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 MTA1Q13330 715 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 C2CD6Q53TS8 623 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 TTC39BQ5VTQ0 682 aaPredicted RBP19.02■□□□□ 0.64
NEDD1-208ENST00000555806 NAA35Q5VZE5 725 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 ZNF677Q86XU0 584 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 XYLT1Q86Y38 959 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 AOPEPQ8N6M6 819 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 NEK11Q8NG66 645 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 SLC20A1Q8WUM9 679 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 CPA5Q8WXQ8 436 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 FOXJ1Q92949 421 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 TTC17Q96AE7 1141 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 PRMT1Q99873 361 aaKnown RBP19.02■□□□□ 0.64
NEDD1-208ENST00000555806 GPR174Q9BXC1 333 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 FBRSQ9HAH7 460 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 WSB2Q9NYS7 404 aaPredicted RBP19.02■□□□□ 0.64
NEDD1-208ENST00000555806 TMEM63CQ9P1W3 806 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 SUN2Q9UH99 717 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 SIK3Q9Y2K2 1263 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 DAAM1Q9Y4D1 1078 aa19.02■□□□□ 0.64
NEDD1-208ENST00000555806 MEI4A8MW99 385 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 SCNN1AP37088 669 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 STAT1P42224 750 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 MAPK8P45983 427 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 JAM2P57087 298 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 NOMO3P69849 1222 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 DUOXA1Q1HG43 343 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 SYCP2LQ5T4T6 812 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 OTUD1Q5VV17 481 aaPredicted RBP19.01■□□□□ 0.63
NEDD1-208ENST00000555806 DAB2IPQ5VWQ8 1189 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 PEAR1Q5VY43 1037 aaPredicted RBP19.01■□□□□ 0.63
NEDD1-208ENST00000555806 RNF219Q5W0B1 726 aaPredicted RBP19.01■□□□□ 0.63
NEDD1-208ENST00000555806 FBXL22Q6P050 247 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 SLC23A3Q6PIS1 610 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 SND1Q7KZF4 910 aaKnown RBP eCLIP19.01■□□□□ 0.63
NEDD1-208ENST00000555806 FAM124AQ86V42 546 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 CCAR2Q8N163 923 aaKnown RBP19.01■□□□□ 0.63
NEDD1-208ENST00000555806 CEP76Q8TAP6 659 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 ZNF419Q96HQ0 510 aaPredicted RBP19.01■□□□□ 0.63
NEDD1-208ENST00000555806 RPRD1AQ96P16 312 aaPredicted RBP19.01■□□□□ 0.63
NEDD1-208ENST00000555806 NPY6RQ99463 290 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 NAT10Q9H0A0 1025 aaKnown RBP19.01■□□□□ 0.63
NEDD1-208ENST00000555806 PRSS16Q9NQE7 514 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 PIGVQ9NUD9 493 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 NOCTQ9UK39 431 aaKnown RBP19.01■□□□□ 0.63
NEDD1-208ENST00000555806 VANGL2Q9ULK5 521 aa19.01■□□□□ 0.63
NEDD1-208ENST00000555806 A0A1B0GVM2 712 aa19■□□□□ 0.63
NEDD1-208ENST00000555806 TCAF2A6NFQ2 919 aa19■□□□□ 0.63
NEDD1-208ENST00000555806 PAGE1O75459 146 aa19■□□□□ 0.63
NEDD1-208ENST00000555806 PDGFRAP16234 1089 aa19■□□□□ 0.63
NEDD1-208ENST00000555806 GGCXP38435 758 aa19■□□□□ 0.63
NEDD1-208ENST00000555806 CTSOP43234 321 aaPredicted RBP19■□□□□ 0.63
NEDD1-208ENST00000555806 NUMBP49757 651 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms