RNA–Protein interactions for RNA: ENST00000555557.5

SRP54-208, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 1,949 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-208ENST00000555557 TRIP13Q15645 432 aaPredicted RBP10.52□□□□□ -0.73
SRP54-208ENST00000555557 ARHGAP15Q53QZ3 475 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 ALFQ53S48 1182 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 ANKRD54Q6NXT1 300 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 TMCO3Q6UWJ1 677 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 TMEM184AQ6ZMB5 413 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 LGI2Q8N0V4 545 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 MICALL1Q8N3F8 863 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 TTC13Q8NBP0 860 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 LEMD2Q8NC56 503 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 ST13P5Q8NFI4 369 aaPredicted RBP10.52□□□□□ -0.73
SRP54-208ENST00000555557 RIN3Q8TB24 985 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 SLC35B2Q8TB61 432 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 TBC1D31Q96DN5 1066 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 CELF6Q96J87 481 aaKnown RBP10.52□□□□□ -0.73
SRP54-208ENST00000555557 RPRD1AQ96P16 312 aaPredicted RBP10.52□□□□□ -0.73
SRP54-208ENST00000555557 TRIM51Q9BSJ1 452 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 HOMER3Q9NSC5 361 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 TMEM51Q9NW97 253 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 CFAP97Q9P2B7 532 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 PCYOX1Q9UHG3 505 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 ZNF148Q9UQR1 794 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 NOTCH4Q99466 2003 aa10.52□□□□□ -0.73
SRP54-208ENST00000555557 UNC80Q8N2C7 3258 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 ESYT3A0FGR9 886 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 H7C0C1 242 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 LEFTY2O00292 366 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 ZNF197O14709 1029 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 TSPAN3O60637 253 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 PRAMEF12O95522 483 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 POU2F2P09086 479 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 RBP3P10745 1247 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 ZFXP17010 805 aaPredicted RBP10.51□□□□□ -0.73
SRP54-208ENST00000555557 HOXC13P31276 330 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 ATP5OP48047 213 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 FNTAP49354 379 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 NUMBP49757 651 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 SGSHP51688 502 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 NRLP54845 237 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 VCPP55072 806 aaKnown RBP10.51□□□□□ -0.73
SRP54-208ENST00000555557 OASLQ15646 514 aaKnown RBP10.51□□□□□ -0.73
SRP54-208ENST00000555557 LRRC31Q6UY01 552 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 TFAP2DQ7Z6R9 452 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 GPR149Q86SP6 731 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 GLIS1Q8NBF1 620 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 ATL2Q8NHH9 583 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 CCDC26Q8TAB7 109 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 SH3RF2Q8TEC5 729 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 USP13Q92995 863 aaPredicted RBP10.51□□□□□ -0.73
SRP54-208ENST00000555557 PNKPQ96T60 521 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 TRIM31Q9BZY9 425 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 DZANK1Q9NVP4 752 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 CLEC1BQ9P126 229 aa10.51□□□□□ -0.73
SRP54-208ENST00000555557 F5H5T6 163 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 MCF2LO15068 1137 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 TBX10O75333 385 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 HEXIM1O94992 359 aaKnown RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 PAPLNO95428 1278 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 ZSCAN5DPP0CG00 497 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 ETS1P14921 441 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 ZNF135P52742 658 aaPredicted RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 GDF10P55107 478 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 RPS24P62847 133 aaKnown RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 NRG1Q02297 640 aaPredicted RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 GUCY2DQ02846 1103 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 PAFAH1B3Q15102 231 aaKnown RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 ADGRF1Q5T601 910 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 DRICH1Q6PGQ1 229 aaPredicted RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 DARS2Q6PI48 645 aaKnown RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 GSTA5Q7RTV2 222 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 MAATS1Q7Z4T9 603 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 JAMLQ86YT9 394 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 ARID3BQ8IVW6 561 aaPredicted RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 BBS7Q8IWZ6 715 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 LGMNQ99538 433 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 PARD6BQ9BYG5 372 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 ZYG11BQ9C0D3 744 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 KLC2Q9H0B6 622 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 CATSPERBQ9H7T0 1116 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 TDP1Q9NUW8 608 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 CLDND1Q9NY35 253 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 LMCD1Q9NZU5 365 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 ARHGAP26Q9UNA1 814 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 SH3BP1Q9Y3L3 701 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 ZFP37Q9Y6Q3 630 aaPredicted RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 OBSL1O75147 1896 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 IGLV3-10A0A075B6K4 115 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 DRGXA6NNA5 263 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 SGK1O00141 431 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 ECEL1O95672 775 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 IFNB1P01574 187 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 FSHRP23945 695 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 DDX6P26196 483 aaKnown RBP eCLIP10.5□□□□□ -0.73
SRP54-208ENST00000555557 VPS41P49754 854 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 GLE1Q53GS7 698 aaKnown RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 CCDC70Q6NSX1 233 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 Q6ZNB5 142 aa10.5□□□□□ -0.73
SRP54-208ENST00000555557 GET4Q7L5D6 327 aaPredicted RBP10.5□□□□□ -0.73
SRP54-208ENST00000555557 NLRP14Q86W24 1093 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms