RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 MT-ND5P03915 603 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 DUSP1P28562 367 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 CRIP2P52943 208 aaPredicted RBP3.51□□□□□ -1.85
SRP54-207ENST00000555535 EPHB1P54762 984 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 FCN2Q15485 313 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 DNTTIP2Q5QJE6 756 aaKnown RBP3.51□□□□□ -1.85
SRP54-207ENST00000555535 ASPHD1Q5U4P2 390 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 RNF220Q5VTB9 566 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 C8orf82Q6P1X6 216 aaPredicted RBP3.51□□□□□ -1.85
SRP54-207ENST00000555535 MZT2AQ6P582 158 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 LRIG3Q6UXM1 1119 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 FAM47BQ8NA70 645 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 LRTOMTQ8WZ04 291 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 MSLNLQ96KJ4 702 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 LRRC27Q9C0I9 530 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 AAMDCQ9H7C9 122 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 ZNF287Q9HBT7 754 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 C1orf112Q9NSG2 853 aa3.51□□□□□ -1.85
SRP54-207ENST00000555535 DDX20Q9UHI6 824 aaKnown RBP3.51□□□□□ -1.85
SRP54-207ENST00000555535 A0A087WZ62 844 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 INMTO95050 263 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 TBX6O95947 436 aaPredicted RBP3.5□□□□□ -1.85
SRP54-207ENST00000555535 PAK4O96013 591 aaPredicted RBP3.5□□□□□ -1.85
SRP54-207ENST00000555535 AKR1A1P14550 325 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 ARSBP15848 533 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 PDLIM4P50479 330 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 ZNF84P51523 738 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 POLD3Q15054 466 aaPredicted RBP3.5□□□□□ -1.85
SRP54-207ENST00000555535 PGM5Q15124 567 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 CXorf57Q6NSI4 855 aaKnown RBP3.5□□□□□ -1.85
SRP54-207ENST00000555535 KYAT3Q6YP21 454 aaKnown RBP3.5□□□□□ -1.85
SRP54-207ENST00000555535 WDSUB1Q8N9V3 476 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 LMNTD1Q8N9Z9 388 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 FAM156AQ8NDB6 213 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 ZFPM2Q8WW38 1151 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 GJA10Q969M2 543 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 SNX22Q96L94 193 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 SLC25A32Q9H2D1 315 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 ABHD16BQ9H3Z7 469 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 SDF2L1Q9HCN8 221 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 ZNF212Q9UDV6 495 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 LAMP3Q9UQV4 416 aa3.5□□□□□ -1.85
SRP54-207ENST00000555535 RHODO00212 210 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 ENO1P06733 434 aaKnown RBP3.49□□□□□ -1.85
SRP54-207ENST00000555535 NDUFS1P28331 727 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 CIITAP33076 1130 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 CACNB3P54284 484 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 ABATP80404 500 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 GPR18Q14330 331 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 SLC39A14Q15043 492 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 HLFQ16534 295 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 MINDY4Q4G0A6 757 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 ARHGAP29Q52LW3 1261 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 TTC39AQ5SRH9 613 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 FAM90A2PQ658T7 463 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 CTU1Q7Z7A3 348 aaKnown RBP3.49□□□□□ -1.85
SRP54-207ENST00000555535 AKAP1Q92667 903 aaKnown RBP eCLIP3.49□□□□□ -1.85
SRP54-207ENST00000555535 WDR24Q96S15 920 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 TRIM2Q9C040 744 aa3.49□□□□□ -1.85
SRP54-207ENST00000555535 IL18RAPO95256 599 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 BAG4O95429 457 aaKnown RBP3.48□□□□□ -1.85
SRP54-207ENST00000555535 ARP10275 920 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 ATICP31939 592 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 DGKQP52824 942 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 ANAPC15P60006 121 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 FAM102BQ5T8I3 360 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 RRAGBQ5VZM2 374 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 ABLIM2Q6H8Q1 611 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 CCDC149Q6ZUS6 474 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 RHPN2Q8IUC4 686 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 CADM3Q8N126 398 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 CLIP4Q8N3C7 705 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 ZNF845Q96IR2 970 aaPredicted RBP3.48□□□□□ -1.85
SRP54-207ENST00000555535 DUX3Q96PT4 197 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 FAM204AQ9H8W3 233 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 MAP6D1Q9H9H5 199 aa3.48□□□□□ -1.85
SRP54-207ENST00000555535 hCG_2014768A0A024R1R8 64 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 ANKRD62A6NC57 917 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 BECN2A8MW95 431 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 GOLIM4O00461 696 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 TPP1O14773 563 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 LCATP04180 440 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 WNT1P04628 370 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 DAOP14920 347 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 DRD1P21728 446 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 MATN1P21941 496 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 PEX2P28328 305 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 IGHMBP2P38935 993 aaKnown RBP3.47□□□□□ -1.85
SRP54-207ENST00000555535 STAT6P42226 847 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 AGTR2P50052 363 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 DMWDQ09019 674 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 BFSP2Q13515 415 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 ELF2Q15723 593 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 KIAA0753Q2KHM9 967 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 TDRD12Q587J7 1177 aaKnown RBP3.47□□□□□ -1.85
SRP54-207ENST00000555535 TMEM196Q5HYL7 178 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 FNBP1LQ5T0N5 605 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 CHST15Q7LFX5 561 aaPredicted RBP3.47□□□□□ -1.85
SRP54-207ENST00000555535 DGLUCYQ7Z3D6 616 aa3.47□□□□□ -1.85
SRP54-207ENST00000555535 GABPB2Q8TAK5 448 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms