RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 STAMQ92783 540 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 RBM17Q96I25 401 aaKnown RBP5.98□□□□□ -1.45
VRK1-205ENST00000555402 PIGSQ96S52 555 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 ABHD16BQ9H3Z7 469 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 RMI1Q9H9A7 625 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 PLEKHA2Q9HB19 425 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 NRIP3Q9NQ35 241 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 DUSP22Q9NRW4 184 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 RXFP3Q9NSD7 469 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 PI4KBQ9UBF8 816 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 ZNF580Q9UK33 172 aa5.98□□□□□ -1.45
VRK1-205ENST00000555402 CCDC196A0A1B0GTZ2 297 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 FAM90A20PA6NIJ5 464 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 NKX2-8O15522 239 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 PDE8BO95263 885 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 LATS1O95835 1130 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 CYP21A2P08686 494 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 MYCLP12524 364 aaPredicted RBP5.97□□□□□ -1.45
VRK1-205ENST00000555402 LIFRP42702 1097 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 PCP4P48539 62 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 DIO1P49895 249 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 EEFSECP57772 596 aaKnown RBP5.97□□□□□ -1.45
VRK1-205ENST00000555402 VAMP2P63027 116 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 SIM2Q14190 667 aaPredicted RBP5.97□□□□□ -1.45
VRK1-205ENST00000555402 FAM153CQ494X1 144 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 ZNF484Q5JVG2 852 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 MORN5Q5VZ52 161 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 ATG16L1Q676U5 607 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 FAAH2Q6GMR7 532 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 ACSM6Q6P461 480 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 MTHFD1LQ6UB35 978 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.97□□□□□ -1.45
VRK1-205ENST00000555402 RASAL3Q86YV0 1011 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 TCP11L2Q8N4U5 519 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 ANKRD44Q8N8A2 993 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 USP38Q8NB14 1042 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 KTI12Q96EK9 354 aaPredicted RBP5.97□□□□□ -1.45
VRK1-205ENST00000555402 LENG8Q96PV6 779 aaPredicted RBP5.97□□□□□ -1.45
VRK1-205ENST00000555402 REEP2Q9BRK0 252 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 GPR63Q9BZJ6 419 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 KCNK9Q9NPC2 374 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 SERTAD4Q9NUC0 356 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 IRAK4Q9NWZ3 460 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 TMEM160Q9NX00 188 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 DLL3Q9NYJ7 618 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 ARHGAP26Q9UNA1 814 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 TMEM98Q9Y2Y6 226 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 KAT6AQ92794 2004 aa5.97□□□□□ -1.45
VRK1-205ENST00000555402 MBD3L5A6NJ08 208 aaPredicted RBP5.96□□□□□ -1.46
VRK1-205ENST00000555402 TSPAN3O60637 253 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 HEXIM1O94992 359 aaKnown RBP5.96□□□□□ -1.46
VRK1-205ENST00000555402 CNPP09543 421 aaKnown RBP5.96□□□□□ -1.46
VRK1-205ENST00000555402 FAM163BP0C2L3 166 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 ATP1A3P13637 1013 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 TKTP29401 623 aaKnown RBP5.96□□□□□ -1.46
VRK1-205ENST00000555402 RCAN1P53805 252 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 MPP1Q00013 466 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 LMAN2Q12907 356 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 FAM187BQ17R55 369 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 PCID2Q5JVF3 399 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 WDR93Q6P2C0 686 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 KIRREL2Q6UWL6 708 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 RASGRP2Q7LDG7 609 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 TECPR1Q7Z6L1 1165 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 NEK8Q86SG6 692 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 LINS1Q8NG48 757 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 OR52L2PQ8NGH6 319 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 RRP36Q96EU6 259 aaKnown RBP5.96□□□□□ -1.46
VRK1-205ENST00000555402 ADAMTS5Q9UNA0 930 aa5.96□□□□□ -1.46
VRK1-205ENST00000555402 VWA3AA6NCI4 1184 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 H0YIZ8 118 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 ZNF213O14771 459 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 KLK10O43240 276 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 HNRNPRO43390 633 aaKnown RBP5.95□□□□□ -1.46
VRK1-205ENST00000555402 SLC3A2P08195 630 aaKnown RBP5.95□□□□□ -1.46
VRK1-205ENST00000555402 HNRNPA1P09651 372 aaKnown RBP eCLIP5.95□□□□□ -1.46
VRK1-205ENST00000555402 IFIT1P09914 478 aaKnown RBP5.95□□□□□ -1.46
VRK1-205ENST00000555402 FPR3P25089 353 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 GALNSP34059 522 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 JAK3P52333 1124 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 COPB1P53618 953 aaKnown RBP5.95□□□□□ -1.46
VRK1-205ENST00000555402 RAE1P78406 368 aaKnown RBP5.95□□□□□ -1.46
VRK1-205ENST00000555402 PSG6Q00889 435 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 DCTN1Q14203 1278 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 TMEM119Q4V9L6 283 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 AWAT2Q6E213 333 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 SUMO4Q6EEV6 95 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 ANKRD16Q6P6B7 361 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 BBS12Q6ZW61 710 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 C12orf76Q8N812 135 aaPredicted RBP5.95□□□□□ -1.46
VRK1-205ENST00000555402 PCYOX1LQ8NBM8 494 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 DENND1AQ8TEH3 1009 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 GLMPQ8WWB7 406 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 HS6ST2Q96MM7 605 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 JMJD4Q9H9V9 463 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 PDE11AQ9HCR9 933 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 TERF2IPQ9NYB0 399 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 MAP3K20Q9NYL2 800 aaKnown RBP5.95□□□□□ -1.46
VRK1-205ENST00000555402 TFCP2L1Q9NZI6 479 aa5.95□□□□□ -1.46
VRK1-205ENST00000555402 SAC3D1A6NKF1 404 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms