RNA–Protein interactions for RNA: ENST00000555232.5

ARHGEF40-206, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 2

Gene ARHGEF40, Length 3,902 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-206ENST00000555232 VEPH1Q14D04 833 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 LAYNQ6UX15 382 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 KCTD15Q96SI1 283 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 KIAA1551Q9HCM1 1747 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 CBX6O95503 412 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 PYGLP06737 847 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 HDAC4P56524 1084 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 CTBP1Q13363 440 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 MSS51Q4VC12 460 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 TAF1BQ53T94 588 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 MARCH8Q5T0T0 291 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 CDCA2Q69YH5 1023 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 ITPRIPL1Q6GPH6 555 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 PRCCQ92733 491 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 FCRL2Q96LA5 508 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 TTC1Q99614 292 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 MANSC1Q9H8J5 431 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 COL5A3P25940 1745 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 THSD7AQ9UPZ6 1657 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 A0A1W2PQH9 124 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 TCRBV9S1A1TA0A576 114 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 SDR42E2A6NKP2 422 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 CES2O00748 559 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 CIB2O75838 187 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 METTL18O95568 372 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 PIGRP01833 764 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 MBL2P11226 248 aaPredicted RBP12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 ACLYP53396 1101 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 RBM23Q86U06 439 aaKnown RBP12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 ZCCHC9Q8N567 271 aaKnown RBP12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 GSDMBQ8TAX9 411 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 PHF21BQ96EK2 531 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 PIGVQ9NUD9 493 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 HACD3Q9P035 362 aa12.54□□□□□ -0.4
ARHGEF40-206ENST00000555232 ANKRD12Q6UB98 2062 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 H0Y626 953 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 MYL4P12829 197 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 TBX4P57082 545 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 ZNF252P-AS1Q0IIN9 211 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 USP4Q13107 963 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 MTDHQ86UE4 582 aaKnown RBP12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 WDR75Q8IWA0 830 aaKnown RBP12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 MPP5Q8N3R9 675 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 LRRC52Q8N7C0 313 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 OMDQ99983 421 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 MARCH2Q9P0N8 246 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 HEY2Q9UBP5 337 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 HAUS5O94927 633 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 OCRLQ01968 901 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 TAF10Q12962 218 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 ZNF280DQ6N043 979 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 LGI2Q8N0V4 545 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 POU5F2Q8N7G0 328 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 SEPT8Q92599 483 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 FAM161BQ96MY7 647 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 FAM129AQ9BZQ8 928 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 C15orf41Q9Y2V0 281 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 ADGRA2Q96PE1 1338 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 MCM3APO60318 1980 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 GJA1P17302 382 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 CYP3A5P20815 502 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 HARS2P49590 506 aaKnown RBP12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 RASSF2P50749 326 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 SLC5A3P53794 718 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 POLE2P56282 527 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 STX3Q13277 289 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 PDCD2Q16342 344 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 TLDC1Q6P9B6 456 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 C15orf39Q6ZRI6 1047 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 UNC93AQ86WB7 457 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 DDI1Q8WTU0 396 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 NDNQ99608 321 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 ROPN1BQ9BZX4 212 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 ROPN1Q9HAT0 212 aaPredicted RBP12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 NDFIP2Q9NV92 336 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 NOP53Q9NZM5 478 aaKnown RBP12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 MOSPD1Q9UJG1 213 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 STYXL1Q9Y6J8 313 aa12.53□□□□□ -0.4
ARHGEF40-206ENST00000555232 YWHAQP27348 245 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 ADRA1BP35368 520 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 RPS6KA3P51812 740 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 ITGA9Q13797 1035 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 COL9A2Q14055 689 aaPredicted RBP12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 NOMO1Q15155 1222 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 PPM1JQ5JR12 505 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 CLEC20AQ6ZU45 233 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 EFCAB3Q8N7B9 438 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 AGAP11Q8TF27 550 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 MFSD3Q96ES6 412 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 VPS39Q96JC1 886 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 COLEC11Q9BWP8 271 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 BATF3Q9NR55 127 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 ZDHHC18Q9NUE0 388 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 GTF2IRD1Q9UHL9 959 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 PCDHB5Q9Y5E4 795 aa12.52□□□□□ -0.4
ARHGEF40-206ENST00000555232 LRIG2O94898 1065 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 ZNF865P0CJ78 1059 aaPredicted RBP12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 AXLP30530 894 aa12.52□□□□□ -0.41
ARHGEF40-206ENST00000555232 CHRNA4P43681 627 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms