RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 CHST12Q9NRB3 414 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 CHRAC1Q9NRG0 131 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 SNX15Q9NRS6 342 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 CAPN8A6NHC0 703 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 ZBTB42B2RXF5 422 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 C22orf31O95567 290 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 USP17L7P0C7H9 530 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 CYP2C9P11712 490 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 L1CAMP32004 1257 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 SERPINB9P50453 376 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 ZNF280AP59817 542 aaPredicted RBP12.16□□□□□ -0.46
XRCC3-208ENST00000554811 FBXO47Q5MNV8 452 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 SYPL2Q5VXT5 272 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 HFE2Q6ZVN8 426 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 UBR7Q8N806 425 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 NLGN2Q8NFZ4 835 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 OPTNQ96CV9 577 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 ZBED3Q96IU2 234 aaPredicted RBP12.16□□□□□ -0.46
XRCC3-208ENST00000554811 LRGUKQ96M69 825 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 STX18Q9P2W9 335 aaKnown RBP12.16□□□□□ -0.46
XRCC3-208ENST00000554811 LRRC42Q9Y546 428 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 PCDHA11Q9Y5I1 949 aa12.16□□□□□ -0.46
XRCC3-208ENST00000554811 GOLGA4Q13439 2230 aaKnown RBP12.16□□□□□ -0.46
XRCC3-208ENST00000554811 TPST1O60507 370 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 ACADSP16219 412 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 CXCR3P49682 368 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 SLC18A2Q05940 514 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 CTBP1Q13363 440 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 TRMT5Q32P41 509 aaKnown RBP12.15□□□□□ -0.46
XRCC3-208ENST00000554811 FAM219BQ5XKK7 198 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 CHSY1Q86X52 802 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 TDRD5Q8NAT2 981 aaKnown RBP12.15□□□□□ -0.46
XRCC3-208ENST00000554811 PHC3Q8NDX5 983 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 ZNF398Q8TD17 642 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 BCO2Q9BYV7 579 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 RHOBTB2Q9BYZ6 727 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 FRMD8P1Q9BZ68 369 aaPredicted RBP12.15□□□□□ -0.46
XRCC3-208ENST00000554811 SEMA6AQ9H2E6 1030 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 GBA2Q9HCG7 927 aaPredicted RBP12.15□□□□□ -0.46
XRCC3-208ENST00000554811 CYLDQ9NQC7 956 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 CLIC5Q9NZA1 410 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 GPRC5DQ9NZD1 345 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 LNPEPQ9UIQ6 1025 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 VANGL2Q9ULK5 521 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 A0A0A0MRY4 1105 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 MAGEA13PA6NCF6 341 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 STX16-NPEPL1H3BU86 382 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 TSPAN1O60635 241 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 ALDOAP04075 364 aaKnown RBP12.15□□□□□ -0.46
XRCC3-208ENST00000554811 CASP2P42575 452 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 TKTL1P51854 596 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 HABP4Q5JVS0 413 aaKnown RBP12.15□□□□□ -0.46
XRCC3-208ENST00000554811 IRGCQ6NXR0 463 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 ST13P4Q8IZP2 240 aaPredicted RBP12.15□□□□□ -0.46
XRCC3-208ENST00000554811 SPATA13Q96N96 652 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 CDRT15Q96T59 188 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 VCX3BQ9H321 246 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 ASB7Q9H672 318 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 KRT82Q9NSB4 513 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 RNF181Q9P0P0 153 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 ITGA11Q9UKX5 1188 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 EFR3BQ9Y2G0 817 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 MCM3APO60318 1980 aa12.15□□□□□ -0.46
XRCC3-208ENST00000554811 CCL22O00626 93 aa12.15□□□□□ -0.47
XRCC3-208ENST00000554811 TM7SF2O76062 418 aa12.15□□□□□ -0.47
XRCC3-208ENST00000554811 CDH5P33151 784 aaPredicted RBP12.15□□□□□ -0.47
XRCC3-208ENST00000554811 AQP4P55087 323 aa12.15□□□□□ -0.47
XRCC3-208ENST00000554811 CNGA3Q16281 694 aa12.15□□□□□ -0.47
XRCC3-208ENST00000554811 PCDH20Q8N6Y1 951 aaKnown RBP12.15□□□□□ -0.47
XRCC3-208ENST00000554811 ICA1LQ8NDH6 482 aa12.15□□□□□ -0.47
XRCC3-208ENST00000554811 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.15□□□□□ -0.47
XRCC3-208ENST00000554811 CDCA5Q96FF9 252 aa12.15□□□□□ -0.47
XRCC3-208ENST00000554811 ECSITQ9BQ95 431 aa12.15□□□□□ -0.47
XRCC3-208ENST00000554811 COG4Q9H9E3 785 aa12.15□□□□□ -0.47
XRCC3-208ENST00000554811 COPS7BQ9H9Q2 264 aaPredicted RBP12.15□□□□□ -0.47
XRCC3-208ENST00000554811 ARHGEF4Q9NR80 690 aa12.15□□□□□ -0.47
XRCC3-208ENST00000554811 SSX2IPQ9Y2D8 614 aa12.15□□□□□ -0.47
XRCC3-208ENST00000554811 CSPG5O95196 566 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 LTFP02788 710 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 SERPINE1P05121 402 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 MYL3P08590 195 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 IRX1P78414 480 aaPredicted RBP12.14□□□□□ -0.47
XRCC3-208ENST00000554811 MAP3K10Q02779 954 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 BST2Q10589 180 aaKnown RBP12.14□□□□□ -0.47
XRCC3-208ENST00000554811 CDC16Q13042 620 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 SH2D4BQ5SQS7 431 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 WSCD1Q658N2 575 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 FRMD7Q6ZUT3 714 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 EXOC8Q8IYI6 725 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 ZNF567Q8N184 647 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 ZNF483Q8TF39 744 aaPredicted RBP12.14□□□□□ -0.47
XRCC3-208ENST00000554811 CERS2Q96G23 380 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 KCNK16Q96T55 309 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 GCOM2Q9BZD3 368 aaPredicted RBP12.14□□□□□ -0.47
XRCC3-208ENST00000554811 PLEKHA5Q9HAU0 1116 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 RUVBL2Q9Y230 463 aaKnown RBP12.14□□□□□ -0.47
XRCC3-208ENST00000554811 LRRC37AA6NMS7 1700 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 KPNA7A9QM74 516 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 C9JVG2 144 aa12.14□□□□□ -0.47
XRCC3-208ENST00000554811 SMAPO00193 183 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms