RNA–Protein interactions for RNA: ENST00000554731.1

RDH11-207, Transcript of retinol dehydrogenase 11, humanhuman

TSL 3

Gene RDH11, Length 888 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-207ENST00000554731 CDH18Q13634 790 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 CNGA2Q16280 664 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 HNRNPA1L2Q32P51 320 aaKnown RBP12.95□□□□□ -0.34
RDH11-207ENST00000554731 CCDC157Q569K6 752 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 KCNT1Q5JUK3 1230 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 ZNF658Q5TYW1 1059 aaPredicted RBP12.95□□□□□ -0.34
RDH11-207ENST00000554731 ANKRD40Q6AI12 368 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 CCDC117Q8IWD4 279 aaPredicted RBP12.95□□□□□ -0.34
RDH11-207ENST00000554731 HNRNPLLQ8WVV9 542 aaKnown RBP12.95□□□□□ -0.34
RDH11-207ENST00000554731 SKA1Q96BD8 255 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 LMLNQ96KR4 655 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 HSFY1Q96LI6 401 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 NT5C1BQ96P26 610 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 GSDMAQ96QA5 445 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 ORAI3Q9BRQ5 295 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 ACE2Q9BYF1 805 aaPredicted RBP12.95□□□□□ -0.34
RDH11-207ENST00000554731 FBXL12Q9NXK8 326 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 FTSJ1Q9UET6 329 aa12.95□□□□□ -0.34
RDH11-207ENST00000554731 A0A1W2PPC4 97 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 TRABD2BA6NFA1 517 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 LRRC72A6NJI9 287 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 VILLO15195 856 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 PAPSS1O43252 624 aaPredicted RBP12.94□□□□□ -0.34
RDH11-207ENST00000554731 SIN3BO75182 1162 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 SMC2O95347 1197 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 IGHV4-34P06331 123 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 BRD2P25440 801 aaKnown RBP12.94□□□□□ -0.34
RDH11-207ENST00000554731 FMO5P49326 533 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 PMS1P54277 932 aaKnown RBP12.94□□□□□ -0.34
RDH11-207ENST00000554731 GALCP54803 685 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 RPS24P62847 133 aaKnown RBP12.94□□□□□ -0.34
RDH11-207ENST00000554731 IL9RQ01113 521 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 CYP4F3Q08477 520 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 SMAD1Q15797 465 aaKnown RBP12.94□□□□□ -0.34
RDH11-207ENST00000554731 CST6Q15828 149 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 NADSYN1Q6IA69 706 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 NCEH1Q6PIU2 408 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 MARCH9Q86YJ5 346 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 DHX40Q8IX18 779 aaKnown RBP12.94□□□□□ -0.34
RDH11-207ENST00000554731 PPM1KQ8N3J5 372 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 CARNMT1Q8N4J0 409 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 KDM1BQ8NB78 822 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 CLEC4CQ8WTT0 213 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 MYO19Q96H55 970 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 PRICKLE1Q96MT3 831 aaPredicted RBP12.94□□□□□ -0.34
RDH11-207ENST00000554731 SERPINB11Q96P15 392 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 GTPBP4Q9BZE4 634 aaKnown RBP12.94□□□□□ -0.34
RDH11-207ENST00000554731 GDPD2Q9HCC8 539 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 METTL14Q9HCE5 456 aaKnown RBP12.94□□□□□ -0.34
RDH11-207ENST00000554731 SCUBE2Q9NQ36 999 aa12.94□□□□□ -0.34
RDH11-207ENST00000554731 A0A1B0GTQ1 180 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 A0A1W2PP55 124 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 FAM149AA5PLN7 773 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 TRIM49BA6NDI0 452 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 PMM2O15305 246 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 MID1O15344 667 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 SART1O43290 800 aaKnown RBP12.93□□□□□ -0.34
RDH11-207ENST00000554731 RNASEH2AO75792 299 aaKnown RBP12.93□□□□□ -0.34
RDH11-207ENST00000554731 MOCS3O95396 460 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 C1QBPQ07021 282 aaKnown RBP12.93□□□□□ -0.34
RDH11-207ENST00000554731 CETN1Q12798 172 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 NNTQ13423 1086 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 CAMK2BQ13554 666 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 ARID5BQ14865 1188 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 SOWAHCQ53LP3 525 aaPredicted RBP12.93□□□□□ -0.34
RDH11-207ENST00000554731 C9orf64Q5T6V5 341 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 PDCD7Q8N8D1 485 aaKnown RBP12.93□□□□□ -0.34
RDH11-207ENST00000554731 OR2T34Q8NGX1 318 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 DQX1Q8TE96 717 aaKnown RBP12.93□□□□□ -0.34
RDH11-207ENST00000554731 FAM149B1Q96BN6 582 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 FCRL2Q96LA5 508 aaPredicted RBP12.93□□□□□ -0.34
RDH11-207ENST00000554731 MRGPRX3Q96LB0 322 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 SLC6A18Q96N87 628 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 OMDQ99983 421 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 ZSWIM1Q9BR11 485 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 MIS12Q9H081 205 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 NUCKS1Q9H1E3 243 aaKnown RBP12.93□□□□□ -0.34
RDH11-207ENST00000554731 NEUROG2Q9H2A3 272 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 SERGEFQ9UGK8 458 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 INTS6Q9UL03 887 aaKnown RBP12.93□□□□□ -0.34
RDH11-207ENST00000554731 FZD4Q9ULV1 537 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 ERVW-1Q9UQF0 538 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 TLR6Q9Y2C9 796 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 CEP83Q9Y592 693 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 ITPR1Q14643 2758 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 TMEM131Q92545 1883 aa12.93□□□□□ -0.34
RDH11-207ENST00000554731 EDDM13A0A1B0GTR0 161 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 TARSL2A2RTX5 802 aaKnown RBP12.92□□□□□ -0.34
RDH11-207ENST00000554731 TTC34A8MYJ7 566 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 RNF225M0QZC1 329 aaPredicted RBP12.92□□□□□ -0.34
RDH11-207ENST00000554731 PSMA7O14818 248 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 LUC7L3O95232 432 aaKnown RBP12.92□□□□□ -0.34
RDH11-207ENST00000554731 MOCS2O96007 188 aaPredicted RBP12.92□□□□□ -0.34
RDH11-207ENST00000554731 SRPRAP08240 638 aaKnown RBP12.92□□□□□ -0.34
RDH11-207ENST00000554731 SLC8A1P32418 973 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 STIM1Q13586 685 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 CCDC40Q4G0X9 1142 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 DCAF6Q58WW2 860 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 FSCBQ5H9T9 825 aa12.92□□□□□ -0.34
RDH11-207ENST00000554731 MS4A13Q5J8X5 152 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms