RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 SETD9Q8NE22 299 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 FAM136AQ96C01 138 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 SEPHS2Q99611 448 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 DPY30Q9C005 99 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 KCNMB3Q9NPA1 279 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 SPATA31A6Q5VVP1 1343 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 RCCD1A6NED2 376 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 GSTM1P09488 218 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 PDK4Q16654 411 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 TYW3Q6IPR3 259 aaKnown RBP14.24□□□□□ -0.13
VTI1B-204ENST00000554659 KCNT2Q6UVM3 1135 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 ARHGAP22Q7Z5H3 698 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 ZNF513Q8N8E2 541 aaPredicted RBP14.24□□□□□ -0.13
VTI1B-204ENST00000554659 LNX1Q8TBB1 728 aaPredicted RBP14.24□□□□□ -0.13
VTI1B-204ENST00000554659 UGT2B28Q9BY64 529 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 RAD21L1Q9H4I0 556 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 MCM8Q9UJA3 840 aa14.24□□□□□ -0.13
VTI1B-204ENST00000554659 RPL26L1Q9UNX3 145 aaKnown RBP14.24□□□□□ -0.13
VTI1B-204ENST00000554659 MT-CO1P00395 513 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 RFX3P48380 749 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 RENBPP51606 427 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 PURAQ00577 322 aaKnown RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 EFEMP1Q12805 493 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 SH3BP5LQ7L8J4 393 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 TMC7Q7Z402 723 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 CLVS1Q8IUQ0 354 aaPredicted RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 REXO4Q9GZR2 422 aaKnown RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 ETNK2Q9NVF9 386 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 TAS2R14Q9NYV8 317 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 A0A087X1B8 175 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 ACKR2O00590 384 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 RGL2O15211 777 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 PHGDHO43175 533 aaKnown RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 LIASO43766 372 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 CPSF4O95639 269 aaKnown RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 TPH1P17752 444 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 RPL14P50914 215 aaKnown RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 MTA1Q13330 715 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 C1DQ13901 141 aaKnown RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 PIWIL2Q8TC59 973 aaKnown RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 C6orf62Q9GZU0 229 aaPredicted RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 KIAA1683Q9H0B3 1180 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 HDHD2Q9H0R4 259 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 CLEC4MQ9H2X3 399 aaPredicted RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 PIF1Q9H611 641 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 ACTR8Q9H981 624 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 PARVBQ9HBI1 364 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 SYNPO2Q9UMS6 1093 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 MAP2P11137 1827 aaKnown RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 F8VP50 259 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 RHOCP08134 193 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 SLC2A4P14672 509 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 ETS1P14921 441 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 RBL1P28749 1068 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 PPP3CAQ08209 521 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 FRG1Q14331 258 aaKnown RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 INAQ16352 499 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 DGKKQ5KSL6 1271 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 ZNF470Q6ECI4 717 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 CDH24Q86UP0 819 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 UXS1Q8NBZ7 420 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 CAMKK2Q96RR4 588 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 SYT15Q9BQS2 421 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 CEP41Q9BYV8 373 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 MID1IP1Q9NPA3 183 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 RGS18Q9NS28 235 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 ASTN2O75129 1339 aaPredicted RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 VWDEQ8N2E2 1590 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 LRRIQ1Q96JM4 1722 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 CCDC154A6NI56 674 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 CYP1A1P04798 512 aaPredicted RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 SERPINF2P08697 491 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 YY1P25490 414 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 ADIGQ0VDE8 80 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 MAMLD1Q13495 774 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 AADACL2Q6P093 401 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 ALLCQ8N6M5 410 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 FIG4Q92562 907 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 FAM163AQ96GL9 167 aaPredicted RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 ACOX2Q99424 681 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 ADAM30Q9UKF2 790 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 SLC12A8A0AV02 714 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 EPHB6O15197 1021 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 PEX1O43933 1283 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 FAM20BO75063 409 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 OAZ1P54368 228 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 PARP6Q2NL67 630 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 ANKS6Q68DC2 871 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 DHRSXQ8N5I4 330 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 PRELID2Q8N945 189 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 OR56A4Q8NGH8 313 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 TRIM63Q969Q1 353 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 CELF6Q96J87 481 aaKnown RBP14.23□□□□□ -0.13
VTI1B-204ENST00000554659 TBL1YQ9BQ87 522 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 XPNPEP3Q9NQH7 507 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 KLHL3Q9UH77 587 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 NEURL4Q96JN8 1562 aa14.23□□□□□ -0.13
VTI1B-204ENST00000554659 TNS2Q63HR2 1409 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 KLHL18O94889 574 aa14.22□□□□□ -0.13
VTI1B-204ENST00000554659 UPP2O95045 317 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms