RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 OR6Y1Q8NGX8 325 aa5.67□□□□□ -1.5
SCFD1-211ENST00000554437 PRSS3P2Q8NHM4 247 aa5.67□□□□□ -1.5
SCFD1-211ENST00000554437 CSGALNACT1Q8TDX6 532 aa5.67□□□□□ -1.5
SCFD1-211ENST00000554437 GOLGA1Q92805 767 aa5.67□□□□□ -1.5
SCFD1-211ENST00000554437 TRIM63Q969Q1 353 aa5.67□□□□□ -1.5
SCFD1-211ENST00000554437 SCNM1Q9BWG6 230 aa5.67□□□□□ -1.5
SCFD1-211ENST00000554437 IPO11Q9UI26 975 aaKnown RBP5.67□□□□□ -1.5
SCFD1-211ENST00000554437 KCND3Q9UK17 655 aa5.67□□□□□ -1.5
SCFD1-211ENST00000554437 LZTS1Q9Y250 596 aa5.67□□□□□ -1.5
SCFD1-211ENST00000554437 COPG1Q9Y678 874 aaKnown RBP5.67□□□□□ -1.5
SCFD1-211ENST00000554437 ZNF804BA4D1E1 1349 aa5.67□□□□□ -1.5
SCFD1-211ENST00000554437 C2CD4BA6NLJ0 364 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 E7EVH7 732 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 CREB3O43889 395 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 PIP5K1CO60331 668 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 KRT38O76015 456 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 HEXIM1O94992 359 aaKnown RBP5.66□□□□□ -1.5
SCFD1-211ENST00000554437 TFEBP19484 476 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 CPA2P48052 419 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 PCP4P48539 62 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 PRKAA2P54646 552 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 SLC12A2P55011 1212 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 RPS13P62277 151 aaKnown RBP5.66□□□□□ -1.5
SCFD1-211ENST00000554437 CFHR1Q03591 330 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 CUL4BQ13620 913 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 EARS2Q5JPH6 523 aaKnown RBP5.66□□□□□ -1.5
SCFD1-211ENST00000554437 LIPMQ5VYY2 423 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 MORN5Q5VZ52 161 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 DGAT2L7PQ6IED9 249 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 ADGRF3Q8IZF5 1079 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 TBC1D20Q96BZ9 403 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 SIGLEC11Q96RL6 698 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 UBA5Q9GZZ9 404 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 OSBPL5Q9H0X9 879 aaPredicted RBP5.66□□□□□ -1.5
SCFD1-211ENST00000554437 WDR26Q9H7D7 661 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 ERVK-5Q9HDB9 667 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 MTPAPQ9NVV4 582 aaKnown RBP eCLIP5.66□□□□□ -1.5
SCFD1-211ENST00000554437 KIF17Q9P2E2 1029 aa5.66□□□□□ -1.5
SCFD1-211ENST00000554437 DNAJC9-AS1A6NH13 148 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 E5RJQ4 531 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 SGPL1O95470 568 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 DHRS4L1P0CG22 281 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 MMP13P45452 471 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 IRX6P78412 446 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-211ENST00000554437 SSBP2P81877 361 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-211ENST00000554437 ID2Q02363 134 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 PDCLQ13371 301 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 RALBP1Q15311 655 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 TAF5Q15542 800 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 TRIP6Q15654 476 aaKnown RBP5.65□□□□□ -1.5
SCFD1-211ENST00000554437 Q4G0T1 1027 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 ZNF474Q6S9Z5 364 aaPredicted RBP5.65□□□□□ -1.5
SCFD1-211ENST00000554437 SYNE3Q6ZMZ3 975 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 RFX8Q6ZV50 586 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 SYT13Q7L8C5 426 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 ADGRF4Q8IZF3 695 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 BCAS4Q8TDM0 211 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 VOPP1Q96AW1 172 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 ZNF347Q96SE7 839 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 SLC29A3Q9BZD2 475 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 MOV10Q9HCE1 1003 aaKnown RBP5.65□□□□□ -1.5
SCFD1-211ENST00000554437 PDE11AQ9HCR9 933 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 TMEM184CQ9NVA4 438 aa5.65□□□□□ -1.5
SCFD1-211ENST00000554437 ADAM10O14672 748 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 IRAK2O43187 625 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 FAM155BO75949 473 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 CYP21A2P08686 494 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 CTSAP10619 480 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 HOXD9P28356 352 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-211ENST00000554437 ADD2P35612 726 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 AARSP49588 968 aaKnown RBP eCLIP5.64□□□□□ -1.51
SCFD1-211ENST00000554437 HSP90AB4PQ58FF6 505 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 KIAA1324Q6UXG2 1013 aaKnown RBP5.64□□□□□ -1.51
SCFD1-211ENST00000554437 FAM57BQ71RH2 274 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 UBE2Q1Q7Z7E8 422 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 MOGAT3Q86VF5 341 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 ARL14EPQ8N8R7 260 aaPredicted RBP5.64□□□□□ -1.51
SCFD1-211ENST00000554437 FAM47BQ8NA70 645 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 AFG1LQ8WV93 481 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 ZFPM2Q8WW38 1151 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 PIGSQ96S52 555 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 ABHD16BQ9H3Z7 469 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 TMLHEQ9NVH6 421 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 SLC8A2Q9UPR5 921 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 BTBD3Q9Y2F9 522 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 LMTK3Q96Q04 1460 aa5.64□□□□□ -1.51
SCFD1-211ENST00000554437 HNRNPRO43390 633 aaKnown RBP5.63□□□□□ -1.51
SCFD1-211ENST00000554437 RBM5P52756 815 aaKnown RBP eCLIP5.63□□□□□ -1.51
SCFD1-211ENST00000554437 DHX8Q14562 1220 aaKnown RBP5.63□□□□□ -1.51
SCFD1-211ENST00000554437 SMAD1Q15797 465 aaKnown RBP5.63□□□□□ -1.51
SCFD1-211ENST00000554437 GPR162Q16538 588 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 ADCK5Q3MIX3 580 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 LRRC24Q50LG9 513 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 ANKRD45Q5TZF3 282 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 ZKSCAN2Q63HK3 967 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 LDHAL6AQ6ZMR3 332 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 SLC2A12Q8TD20 617 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 DENND1AQ8TEH3 1009 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 THAP4Q8WY91 577 aa5.63□□□□□ -1.51
SCFD1-211ENST00000554437 RPL36ALQ969Q0 106 aaKnown RBP5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms