RNA–Protein interactions for RNA: ENST00000554393.2

PTCD2P1-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 1, humanhuman

BASIC

Gene PTCD2P1, Length 1,136 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P1-201ENST00000554393 GABRB2P47870 512 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 DHPSP49366 369 aaPredicted RBP10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 SLC6A3Q01959 620 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 RPL6Q02878 288 aaKnown RBP10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 CAMK2GQ13555 558 aaPredicted RBP10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 TAF5Q15542 800 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 CCDC6Q16204 474 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 FKBP15Q5T1M5 1219 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 TTC39BQ5VTQ0 682 aaPredicted RBP10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 LYSMD4Q5XG99 296 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 MBLAC2Q68D91 279 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 SERPINA13PQ6UXR4 307 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 FAM183BPQ6ZVS7 135 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 CHST9Q7L1S5 443 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 RABEPKQ7Z6M1 372 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 ZNF677Q86XU0 584 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 SYT12Q8IV01 421 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 MFN1Q8IWA4 741 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 CCDC117Q8IWD4 279 aaPredicted RBP10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 DEFB106AQ8N104 65 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 ATP6V0D2Q8N8Y2 350 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 KDM1BQ8NB78 822 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 ANKRD20A12PQ8NF67 263 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 LMLNQ96KR4 655 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 NUCKS1Q9H1E3 243 aaKnown RBP10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 GANQ9H2C0 597 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 TMEM245Q9H330 911 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 SYNCQ9H7C4 482 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 FAM204AQ9H8W3 233 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 PRDM16Q9HAZ2 1276 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 DDIT4Q9NX09 232 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 TAB2Q9NYJ8 693 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 PLA2G4CQ9UP65 541 aa10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 GCN1Q92616 2671 aaKnown RBP10.78□□□□□ -0.68
PTCD2P1-201ENST00000554393 DOCK4Q8N1I0 1966 aa10.77□□□□□ -0.68
PTCD2P1-201ENST00000554393 PCDH15Q96QU1 1955 aa10.77□□□□□ -0.68
PTCD2P1-201ENST00000554393 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 LNP1A1A4G5 178 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 KCNU1A8MYU2 1149 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 F5H5T6 163 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 LUC7L3O95232 432 aaKnown RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 MOCS2O96007 188 aaPredicted RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 ASLP04424 464 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 EPHX1P07099 455 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 POLR2EP19388 210 aaKnown RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 ABCB4P21439 1286 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 TACR2P21452 398 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 PRKCHP24723 683 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 OXTRP30559 389 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 CD70P32970 193 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 NOS2P35228 1153 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 MATKP42679 507 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 PTGER3P43115 390 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 COPAP53621 1224 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 RPS24P62847 133 aaKnown RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 PITX1P78337 314 aaPredicted RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 SLC12A1Q13621 1099 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 CDH18Q13634 790 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 PTPRNQ16849 979 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 FNDC3BQ53EP0 1204 aaKnown RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 ZC3H12AQ5D1E8 599 aaKnown RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 STPG1Q5TH74 334 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 IL31Q6EBC2 164 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 OR6B2Q6IFH4 312 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 KIAA1324Q6UXG2 1013 aaKnown RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 CHSY1Q86X52 802 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 TMPRSS6Q8IU80 811 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 TMEFF1Q8IYR6 380 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 FRMD1Q8N878 549 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 TTC13Q8NBP0 860 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 MSANTD4Q8NCY6 345 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 CEP76Q8TAP6 659 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 WFDC5Q8TCV5 224 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 EPS8L1Q8TE68 723 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 SORCS1Q8WY21 1168 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 PIGKQ92643 395 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 PRCCQ92733 491 aaPredicted RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 FOXJ1Q92949 421 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 TTC17Q96AE7 1141 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 EDEM2Q9BV94 578 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 MKRN2Q9H000 416 aaKnown RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 VPS16Q9H269 839 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 PDCL3Q9H2J4 239 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 SMOC1Q9H4F8 434 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 ITM2CQ9NQX7 267 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 FANCLQ9NW38 375 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 LIMA1Q9UHB6 759 aaKnown RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 PILRBQ9UKJ0 227 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 CYP8B1Q9UNU6 501 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 VPS9D1Q9Y2B5 631 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 SIK3Q9Y2K2 1263 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 LAMA1P25391 3075 aa10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 ASCC3Q8N3C0 2202 aaKnown RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 ASH1LQ9NR48 2969 aaKnown RBP10.77□□□□□ -0.69
PTCD2P1-201ENST00000554393 A0A1B0GVM2 712 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 TCAF2A6NFQ2 919 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 LRRC10BA6NIK2 292 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 LGALS16A8MUM7 142 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 TM4SF5O14894 197 aa10.76□□□□□ -0.69
PTCD2P1-201ENST00000554393 MOCS3O95396 460 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms