RNA–Protein interactions for RNA: ENST00000554018.1

TRAPPC6B-204, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 4

Gene TRAPPC6B, Length 541 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-204ENST00000554018 CEACAM1P13688 526 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CSRP1P21291 193 aaKnown RBP12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 TACR2P21452 398 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CSKP41240 450 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 RPS14P62263 151 aaKnown RBP12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CDK17Q00537 523 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ZNF252P-AS1Q0IIN9 211 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 DCAF12L1Q5VU92 463 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 FAM183BPQ6ZVS7 135 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 FAM71AQ8IYT1 594 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 MINDY1Q8N5J2 469 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ZNF557Q8N988 423 aaPredicted RBP12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 C1orf131Q8NDD1 294 aaKnown RBP12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CADM4Q8NFZ8 388 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 DNASE2BQ8WZ79 361 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 BTN2A3PQ96KV6 586 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SLC2A13Q96QE2 648 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 MIR1-1HGQ9H1L0 117 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 LHX5Q9H2C1 402 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 PLCB1Q9NQ66 1216 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SAMSN1Q9NSI8 373 aaKnown RBP12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 COX16Q9P0S2 106 aa12.31□□□□□ -0.44
TRAPPC6B-204ENST00000554018 FREM2Q5SZK8 3169 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 PLXNA2O75051 1894 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 METTL12A8MUP2 240 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 KCNU1A8MYU2 1149 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 HSF2BPO75031 334 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ERBB2P04626 1255 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 GLI1P08151 1106 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SYPP08247 313 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 GNSP15586 552 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 KRT9P35527 623 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CTSOP43234 321 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 KCNMA1Q12791 1236 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SEMA3BQ13214 749 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 EIF4EBP2Q13542 120 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CDH18Q13634 790 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 KCNJ12Q14500 433 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 PITRM1Q5JRX3 1037 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 EFHC1Q5JVL4 640 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 OR6B2Q6IFH4 312 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 C11orf57Q6ZUT1 292 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 PIP4P1Q86T03 277 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CHSY1Q86X52 802 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CCDC117Q8IWD4 279 aaPredicted RBP12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 HDDC3Q8N4P3 179 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ZCCHC9Q8N567 271 aaKnown RBP12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 MYO19Q96H55 970 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 MRGPRX3Q96LB0 322 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 NOX5Q96PH1 765 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 LMBRD1Q9NUN5 540 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 DDIT4Q9NX09 232 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SUSD2Q9UGT4 822 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SUN2Q9UH99 717 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 DACH1Q9UI36 760 aa12.3□□□□□ -0.44
TRAPPC6B-204ENST00000554018 NBEAQ8NFP9 2946 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 GOLGA4Q13439 2230 aaKnown RBP12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 A0A1B0GTW7 788 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 FAM170AA1A519 330 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 F5H5T6 163 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 H0Y626 953 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 PES1O00541 588 aaKnown RBP12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 OPHN1O60890 802 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SIN3BO75182 1162 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ASLP04424 464 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 C7P10643 843 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ACSL1P33121 698 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 NUMBP49757 651 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ST8SIA6P61647 398 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SHC2P98077 582 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SLC6A3Q01959 620 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 FOXC1Q12948 553 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 RAPGEF1Q13905 1077 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 DRAP1Q14919 205 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 PTPN20Q4JDL3 420 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 OLFML1Q6UWY5 402 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 CIR1Q86X95 450 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 APCDD1Q8J025 514 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ATP6V0D2Q8N8Y2 350 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 RNF34Q969K3 372 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 PRMT1Q99873 361 aaKnown RBP12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 C6orf106Q9H6K1 298 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SYNCQ9H7C4 482 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 FBRSQ9HAH7 460 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ASNSD1Q9NWL6 643 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 KIAA1522Q9P206 1035 aaPredicted RBP12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SLC12A6Q9UHW9 1150 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 EIF2B4Q9UI10 523 aaKnown RBP12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SLCO3A1Q9UIG8 710 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ERVW-1Q9UQF0 538 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 NFE2L3Q9Y4A8 694 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 FHOD1Q9Y613 1164 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SLCO1B1Q9Y6L6 691 aa12.29□□□□□ -0.44
TRAPPC6B-204ENST00000554018 ZFYVE26Q68DK2 2539 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 SPAARA0A1B0GVQ0 90 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 TTC34A8MYJ7 566 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 UPK3BL1B0FP48 263 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 UPK3BL2E5RIL1 263 aa12.28□□□□□ -0.44
TRAPPC6B-204ENST00000554018 BCAT2O15382 392 aaPredicted RBP12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms