RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 OTOGLQ3ZCN5 2332 aa3.52□□□□□ -1.85
SLIRP-202ENST00000553981 ARID2Q68CP9 1835 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 CLUHO75153 1309 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 EML5Q05BV3 1969 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 TRIP11Q15643 1979 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 TDRD15B5MCY1 1934 aaKnown RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 B4GALT5O43286 388 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 CHMP2AO43633 222 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 SLC37A4O43826 429 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 OPHN1O60890 802 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 MOSPD3O75425 235 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 FSBPO95073 299 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 GAAP10253 952 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 GYPEP15421 78 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 SLC9A1P19634 815 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 FCARP24071 287 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 KLRC2P26717 231 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 KIF5BP33176 963 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 CCR2P41597 374 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 SLC26A2P50443 739 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 NAPAP54920 295 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 C21orf58P58505 322 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 IRX6P78412 446 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 DSG1Q02413 1049 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 KRT17Q04695 432 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 ADCY1Q08828 1119 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 ZNF460Q14592 562 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 LPAL2Q16609 132 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 MAN2A1Q16706 1144 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 PFKFB3Q16875 520 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 SLC5A9Q2M3M2 681 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 PRR16Q569H4 304 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 C2orf27AQ580R0 203 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 FAM160B1Q5W0V3 765 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 CES5AQ6NT32 575 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 MIS18BP1Q6P0N0 1132 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 CCDC149Q6ZUS6 474 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 GET4Q7L5D6 327 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 NIPA1Q7RTP0 329 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 GRASPQ7Z6J2 395 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 ADGRG3Q86Y34 549 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 RHPN2Q8IUC4 686 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 PHYKPLQ8IUZ5 450 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 PIK3C3Q8NEB9 887 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 CMASQ8NFW8 434 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 OR52N2Q8NGI0 321 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 PPP1R14CQ8TAE6 165 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 ETNPPLQ8TBG4 499 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 SLC5A5Q92911 643 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 PHKBQ93100 1093 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 TMEM143Q96AN5 459 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 RSPRY1Q96DX4 576 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 TCEAL4Q96EI5 215 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 MYEOVQ96EZ4 313 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 FAM193BQ96PV7 902 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 RPS6KC1Q96S38 1066 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 GAD1Q99259 594 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 ELF4Q99607 663 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 RTP3Q9BQQ7 232 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 CLSTN3Q9BQT9 956 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 CPPED1Q9BRF8 314 aaPredicted RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 ZNF577Q9BSK1 485 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 CPEB1Q9BZB8 566 aaKnown RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 ZMYND12Q9H0C1 365 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 MFSD1Q9H3U5 465 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 WDR26Q9H7D7 661 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 SFXN1Q9H9B4 322 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 LTB4R2Q9NPC1 389 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 ARHGEF3Q9NR81 526 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 VPS54Q9P1Q0 977 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 DNMT3BQ9UBC3 853 aaKnown RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 B4GALT6Q9UBX8 382 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 EIF2B4Q9UI10 523 aaKnown RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 WDR3Q9UNX4 943 aaKnown RBP eCLIP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 PCDHB2Q9Y5E7 798 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 PCDHA10Q9Y5I2 948 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 TNPO3Q9Y5L0 923 aaKnown RBP3.51□□□□□ -1.85
SLIRP-202ENST00000553981 VPS13AQ96RL7 3174 aa3.51□□□□□ -1.85
SLIRP-202ENST00000553981 KANSL1LA0AUZ9 987 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 ERICH2A1L162 156 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 CCDC69A6NI79 296 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 CYSRT1A8MQ03 144 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 HIP1O00291 1037 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 PTGESO14684 152 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 CCL16O15467 120 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 OPA1O60313 960 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 TSPAN1O60635 241 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 APOL3O95236 402 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 VNN2O95498 520 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 ASLP04424 464 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 ZSCAN20P17040 1043 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 AKAP5P24588 427 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 APOBEC3AP31941 199 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 MCM5P33992 734 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 PPM1AP35813 382 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 MLH1P40692 756 aa3.5□□□□□ -1.85
SLIRP-202ENST00000553981 ALDH7A1P49419 539 aaKnown RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 CLK3P49761 638 aaKnown RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 POLGP54098 1239 aaPredicted RBP3.5□□□□□ -1.85
SLIRP-202ENST00000553981 AK2P54819 239 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms