RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 LRRC36Q1X8D7 754 aa12.59□□□□□ -0.39
SHMT2-207ENST00000553837 ZNF618Q5T7W0 954 aa12.59□□□□□ -0.39
SHMT2-207ENST00000553837 KLHDC10Q6PID8 442 aa12.59□□□□□ -0.39
SHMT2-207ENST00000553837 GPR142Q7Z601 462 aa12.59□□□□□ -0.39
SHMT2-207ENST00000553837 ZNF410Q86VK4 478 aa12.59□□□□□ -0.39
SHMT2-207ENST00000553837 ICA1LQ8NDH6 482 aa12.59□□□□□ -0.39
SHMT2-207ENST00000553837 OR6J1Q8NGC5 347 aa12.59□□□□□ -0.39
SHMT2-207ENST00000553837 ABTB1Q969K4 478 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-207ENST00000553837 OSMRQ99650 979 aa12.59□□□□□ -0.39
SHMT2-207ENST00000553837 PLAC1Q9HBJ0 212 aa12.59□□□□□ -0.39
SHMT2-207ENST00000553837 HEY1Q9Y5J3 304 aa12.59□□□□□ -0.39
SHMT2-207ENST00000553837 TEX264Q9Y6I9 313 aa12.59□□□□□ -0.39
SHMT2-207ENST00000553837 CCL15-CCL14A0A0B4J2E2 113 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 IQANK1A0A1B0GTG1 560 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 ARHGAP10A1A4S6 786 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 SPTLC1O15269 473 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 C1QAP02745 245 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 CCDC130P13994 396 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 AKAP5P24588 427 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 LMO2P25791 158 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 AQP4P55087 323 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 DLG1Q12959 904 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 KRT81Q14533 505 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 CCL15Q16663 113 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 CLPPQ16740 277 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-207ENST00000553837 PRAMEF19Q5SWL8 479 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 LPCAT4Q643R3 524 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 ALKAL1Q6UXT8 129 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 ZNF467Q7Z7K2 595 aaPredicted RBP12.58□□□□□ -0.4
SHMT2-207ENST00000553837 DPP9Q86TI2 863 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 NT5DC4Q86YG4 428 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 PALM2Q8IXS6 379 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 PDIK1LQ8N165 341 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 CCDC33Q8N5R6 958 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 SLC25A41Q8N5S1 370 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 DIS3LQ8TF46 1054 aaKnown RBP12.58□□□□□ -0.4
SHMT2-207ENST00000553837 APOPT1Q96IL0 206 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 DNAJC1Q96KC8 554 aaKnown RBP12.58□□□□□ -0.4
SHMT2-207ENST00000553837 ZFRQ96KR1 1074 aaKnown RBP12.58□□□□□ -0.4
SHMT2-207ENST00000553837 C7orf26Q96N11 449 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 FAM111AQ96PZ2 611 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 SOX13Q9UN79 622 aa12.58□□□□□ -0.4
SHMT2-207ENST00000553837 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-207ENST00000553837 A0A088AWK7 358 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 TCRBV9S1A1TA0A576 114 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 CCDC160A6NGH7 325 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 ARHGAP42A6NI28 874 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 KBTBD13C9JR72 458 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 TXNDC9O14530 226 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 KCNN4O15554 427 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 PGM3O95394 542 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 PDGFRBP09619 1106 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 CDK4P11802 303 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 STIP1P31948 543 aaKnown RBP12.57□□□□□ -0.4
SHMT2-207ENST00000553837 MLH1P40692 756 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 FOLH1Q04609 750 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 TBL3Q12788 808 aaKnown RBP12.57□□□□□ -0.4
SHMT2-207ENST00000553837 SLC10A2Q12908 348 aaPredicted RBP12.57□□□□□ -0.4
SHMT2-207ENST00000553837 GRB14Q14449 540 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 C9orf57Q5W0N0 161 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 SLC9A4Q6AI14 798 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 CATSPER4Q7RTX7 472 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 GSTCDQ8NEC7 633 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 KBTBD7Q8WVZ9 684 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 TMEM40Q8WWA1 233 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 PYDC1Q8WXC3 89 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 JADE3Q92613 823 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 DHRS1Q96LJ7 313 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 CCDC106Q9BWC9 280 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 APOL6Q9BWW8 343 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 RNF39Q9H2S5 420 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 TBCCD1Q9NVR7 557 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 PLK2Q9NYY3 685 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 KLK14Q9P0G3 267 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 MORF4L1Q9UBU8 362 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 SORCS3Q9UPU3 1222 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 RALGAPA2Q2PPJ7 1873 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 C15orf38-AP3S2A0A0A6YYH1 394 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 FAM155BO75949 473 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 RECQL4O94761 1208 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 TFAP2AP05549 437 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 SERPINB8P50452 374 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 SLC18A2Q05940 514 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 TFDP2Q14188 446 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 DGKDQ16760 1214 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 DCAF4L1Q3SXM0 396 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 SLC44A4Q53GD3 710 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 FAM47CQ5HY64 1035 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 MDH1BQ5I0G3 518 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 ATG16L1Q676U5 607 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 SLC27A1Q6PCB7 646 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 ARPINQ7Z6K5 226 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 C7orf31Q8N865 590 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 ARL10Q8N8L6 244 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 OR6B3Q8NGW1 331 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 SLC26A7Q8TE54 656 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 FAF2Q96CS3 445 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 SERAC1Q96JX3 654 aa12.57□□□□□ -0.4
SHMT2-207ENST00000553837 TRIM56Q9BRZ2 755 aaKnown RBP12.57□□□□□ -0.4
SHMT2-207ENST00000553837 TINF2Q9BSI4 451 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms