RNA–Protein interactions for RNA: ENST00000553779.5

ACTN1-210, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 530 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-210ENST00000553779 KCTD13Q8WZ19 329 aa10.28□□□□□ -0.76
ACTN1-210ENST00000553779 IGSF8Q969P0 613 aa10.28□□□□□ -0.76
ACTN1-210ENST00000553779 BIRC7Q96CA5 298 aa10.28□□□□□ -0.76
ACTN1-210ENST00000553779 GSDMAQ96QA5 445 aa10.28□□□□□ -0.76
ACTN1-210ENST00000553779 TMEM245Q9H330 911 aa10.28□□□□□ -0.76
ACTN1-210ENST00000553779 PABPC3Q9H361 631 aaKnown RBP10.28□□□□□ -0.76
ACTN1-210ENST00000553779 PRSS16Q9NQE7 514 aa10.28□□□□□ -0.76
ACTN1-210ENST00000553779 FBXL12Q9NXK8 326 aa10.28□□□□□ -0.76
ACTN1-210ENST00000553779 SCML1Q9UN30 329 aa10.28□□□□□ -0.76
ACTN1-210ENST00000553779 FAM221BA6H8Z2 402 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 TNFSF14O43557 240 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 DFNA5O60443 496 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 ATXN1LP0C7T5 689 aaKnown RBP10.27□□□□□ -0.77
ACTN1-210ENST00000553779 HNF1BP35680 557 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 CSKP41240 450 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 MPP7Q5T2T1 576 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 PIK3R6Q5UE93 754 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 PMF1Q6P1K2 205 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 MSANTD2Q6P1R3 559 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 BHLHA9Q7RTU4 235 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 SLCO6A1Q86UG4 719 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 LGI2Q8N0V4 545 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 DDX51Q8N8A6 666 aaKnown RBP eCLIP10.27□□□□□ -0.77
ACTN1-210ENST00000553779 ADAM32Q8TC27 787 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 WFDC5Q8TCV5 224 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 CLEC4CQ8WTT0 213 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 RNF34Q969K3 372 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 IRX2Q9BZI1 471 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-210ENST00000553779 FAM204AQ9H8W3 233 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 SLC12A6Q9UHW9 1150 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 STOML2Q9UJZ1 356 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 RAXQ9Y2V3 346 aa10.27□□□□□ -0.77
ACTN1-210ENST00000553779 COL5A1P20908 1838 aaPredicted RBP10.27□□□□□ -0.77
ACTN1-210ENST00000553779 PTPRQQ9UMZ3 2332 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 SYNJ2BP-COX16A0A087WUM0 186 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 EDDM13A0A1B0GTR0 161 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 A0A1W2PP55 124 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 BICDL2A1A5D9 508 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 F5H5T6 163 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 H0Y8X5 98 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 KCNK3O14649 394 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 MID1O15344 667 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 MED7O43513 233 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 CBFA2T3O75081 653 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 SIN3BO75182 1162 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 ADH1BP00325 375 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 ITGAVP06756 1048 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 SLC6A4P31645 630 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 PPP1R2P41236 205 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 ACADSBP45954 432 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 RPS24P62847 133 aaKnown RBP10.26□□□□□ -0.77
ACTN1-210ENST00000553779 BNC1Q01954 994 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 CST6Q15828 149 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 PTPRNQ16849 979 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 COL28A1Q2UY09 1125 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 ISM2Q6H9L7 571 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 NCEH1Q6PIU2 408 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 USP30Q70CQ3 517 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 RRAGAQ7L523 313 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 PDZD3Q86UT5 571 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 CREBRFQ8IUR6 639 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 MMAAQ8IVH4 418 aaKnown RBP10.26□□□□□ -0.77
ACTN1-210ENST00000553779 CFAP52Q8N1V2 620 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 SCML4Q8N228 414 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 DQX1Q8TE96 717 aaKnown RBP10.26□□□□□ -0.77
ACTN1-210ENST00000553779 HNRNPLLQ8WVV9 542 aaKnown RBP10.26□□□□□ -0.77
ACTN1-210ENST00000553779 TFAP2BQ92481 460 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 ERCC4Q92889 916 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-210ENST00000553779 SLC35C1Q96A29 364 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 HSFY1Q96LI6 401 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 CEP63Q96MT8 703 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 SLC6A18Q96N87 628 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 DCBLD2Q96PD2 775 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 RSPH9Q9H1X1 276 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-210ENST00000553779 MTG2Q9H4K7 406 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 COX16Q9P0S2 106 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 KIAA1522Q9P206 1035 aaPredicted RBP10.26□□□□□ -0.77
ACTN1-210ENST00000553779 CTNND2Q9UQB3 1225 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 TLR6Q9Y2C9 796 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 BTBD3Q9Y2F9 522 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 ZDHHC9Q9Y397 364 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 COQ4Q9Y3A0 265 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 LAMA5O15230 3695 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 DOCK4Q8N1I0 1966 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 LOC400499M0QZD8 3231 aa10.26□□□□□ -0.77
ACTN1-210ENST00000553779 FAM149AA5PLN7 773 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 YKT6O15498 198 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 THAP12O43422 761 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 LUC7L3O95232 432 aaKnown RBP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 CALCAP01258 141 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 IL1BP01584 269 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 IGLV3-27P01718 113 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 HOXB3P14651 431 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 USP8P40818 1118 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 ARRB1P49407 418 aaPredicted RBP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 NUMBP49757 651 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 PMS1P54277 932 aaKnown RBP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 RACK1P63244 317 aaKnown RBP10.25□□□□□ -0.77
ACTN1-210ENST00000553779 ECT2LQ008S8 904 aa10.25□□□□□ -0.77
ACTN1-210ENST00000553779 BECN1Q14457 450 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms