RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 CHST9Q7L1S5 443 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 ZNF557Q8N988 423 aaPredicted RBP23.56■■□□□ 1.36
TDP1-206ENST00000553569 WFIKKN2Q8TEU8 576 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 UCMAQ8WVF2 138 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 CENPIQ92674 756 aaPredicted RBP23.56■■□□□ 1.36
TDP1-206ENST00000553569 ACOX2Q99424 681 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 CNPY3Q9BT09 278 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 THAP2Q9H0W7 228 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 STARD13Q9Y3M8 1113 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 R4GN57 208 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 CACNA1HO95180 2353 aa23.56■■□□□ 1.36
TDP1-206ENST00000553569 ADAM23O75077 832 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 DESP17661 470 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 PSMA2P25787 234 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 PXNP49023 591 aaPredicted RBP23.55■■□□□ 1.36
TDP1-206ENST00000553569 MAPK8IP2Q13387 824 aaPredicted RBP23.55■■□□□ 1.36
TDP1-206ENST00000553569 ARL13BQ3SXY8 428 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 TMEM215Q68D42 235 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 SCYL2Q6P3W7 929 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 CHPFQ8IZ52 775 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 AHI1Q8N157 1196 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 CCAR2Q8N163 923 aaKnown RBP23.55■■□□□ 1.36
TDP1-206ENST00000553569 CCDC185Q8N715 623 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 DDX51Q8N8A6 666 aaKnown RBP eCLIP23.55■■□□□ 1.36
TDP1-206ENST00000553569 FIBINQ8TAL6 211 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 KCNV2Q8TDN2 545 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 SORCS1Q8WY21 1168 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 CHP1Q99653 195 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 TRIM7Q9C029 511 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 ELOVL2Q9NXB9 296 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 CACNA2D2Q9NY47 1150 aa23.55■■□□□ 1.36
TDP1-206ENST00000553569 A0A1B0GVM2 712 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 SSU72P8A0A1W2PR75 194 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 TCAF2A6NFQ2 919 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 AKR1B10O60218 316 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 FNTBP49356 437 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 EIF4HQ15056 248 aaKnown RBP23.54■■□□□ 1.36
TDP1-206ENST00000553569 FUT11Q495W5 492 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 FSCBQ5H9T9 825 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 TSTD1Q8NFU3 115 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 ERLEC1Q96DZ1 483 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 HAPLN3Q96S86 360 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 MRPL47Q9HD33 250 aaKnown RBP23.54■■□□□ 1.36
TDP1-206ENST00000553569 ZSCAN32Q9NX65 697 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 NENFQ9UMX5 172 aa23.54■■□□□ 1.36
TDP1-206ENST00000553569 TMEM191CA6NGB0 347 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 E9PAM4 449 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 HOXB2P14652 356 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 HNRNPLP14866 589 aaKnown RBP eCLIP23.53■■□□□ 1.36
TDP1-206ENST00000553569 NTSR1P30989 418 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 ADRA1BP35368 520 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 NUMBP49757 651 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 NRLP54845 237 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 CRY1Q16526 586 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 SLC18A3Q16572 532 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 MBLAC2Q68D91 279 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 SDE2Q6IQ49 451 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 ZC3H14Q6PJT7 736 aaKnown RBP23.53■■□□□ 1.36
TDP1-206ENST00000553569 TMEM92Q6UXU6 159 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 LRRC31Q6UY01 552 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 ADIPOR2Q86V24 386 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 TC2NQ8N9U0 490 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 CYB5D2Q8WUJ1 264 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 PHOX2BQ99453 314 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 FANCMQ8IYD8 2048 aa23.53■■□□□ 1.36
TDP1-206ENST00000553569 SRGAP2O75044 1071 aa23.52■■□□□ 1.36
TDP1-206ENST00000553569 APBB3O95704 486 aa23.52■■□□□ 1.36
TDP1-206ENST00000553569 GALCP54803 685 aa23.52■■□□□ 1.36
TDP1-206ENST00000553569 ZNF252P-AS1Q0IIN9 211 aa23.52■■□□□ 1.36
TDP1-206ENST00000553569 ASTE1Q2TB18 679 aaPredicted RBP23.52■■□□□ 1.36
TDP1-206ENST00000553569 KIAA0907Q7Z7F0 614 aaPredicted RBP23.52■■□□□ 1.36
TDP1-206ENST00000553569 ZNF683Q8IZ20 524 aa23.52■■□□□ 1.36
TDP1-206ENST00000553569 ATRIPQ8WXE1 791 aa23.52■■□□□ 1.36
TDP1-206ENST00000553569 ARHGEF26Q96DR7 871 aa23.52■■□□□ 1.36
TDP1-206ENST00000553569 LMLNQ96KR4 655 aa23.52■■□□□ 1.36
TDP1-206ENST00000553569 C1orf74Q96LT6 269 aa23.52■■□□□ 1.36
TDP1-206ENST00000553569 FAM126AQ9BYI3 521 aaPredicted RBP23.52■■□□□ 1.36
TDP1-206ENST00000553569 NHEJ1Q9H9Q4 299 aaPredicted RBP23.52■■□□□ 1.36
TDP1-206ENST00000553569 THAP10Q9P2Z0 257 aaPredicted RBP23.52■■□□□ 1.36
TDP1-206ENST00000553569 RAD54BQ9Y620 910 aa23.52■■□□□ 1.36
TDP1-206ENST00000553569 MUC22E2RYF6 1773 aaPredicted RBP23.51■■□□□ 1.35
TDP1-206ENST00000553569 CNTN5O94779 1100 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 POLR2EP19388 210 aaKnown RBP23.51■■□□□ 1.35
TDP1-206ENST00000553569 CSKP41240 450 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 IL12RB1P42701 662 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 DGKEP52429 567 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 ZNF234Q14588 700 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 C5orf22Q49AR2 442 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 ALFQ53S48 1182 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 PITRM1Q5JRX3 1037 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 ACBD5Q5T8D3 534 aaPredicted RBP23.51■■□□□ 1.35
TDP1-206ENST00000553569 ANO7Q6IWH7 933 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 CAMKK1Q8N5S9 505 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 NELL1Q92832 810 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 NTAN1Q96AB6 310 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 CCDC42Q96M95 316 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 NUP85Q9BW27 656 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 PACSIN1Q9BY11 444 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 SPTLC3Q9NUV7 552 aa23.51■■□□□ 1.35
TDP1-206ENST00000553569 MPP6Q9NZW5 540 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms