RNA–Protein interactions for RNA: ENST00000553488.5

ATXN3-219, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-219ENST00000553488 ZMIZ2Q8NF64 920 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 RASSF8Q8NHQ8 419 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 SCAMP5Q8TAC9 235 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 UBL7Q96S82 380 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-219ENST00000553488 GZF1Q9H116 711 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-219ENST00000553488 SOX17Q9H6I2 414 aaPredicted RBP7.69□□□□□ -1.18
ATXN3-219ENST00000553488 GMIPQ9P107 970 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 SH3BP1Q9Y3L3 701 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 SLCO1B1Q9Y6L6 691 aa7.69□□□□□ -1.18
ATXN3-219ENST00000553488 MEI4A8MW99 385 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 KCNJ18B7U540 433 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 WASH3PC4AMC7 463 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 NEDD8-MDP1E9PL57 170 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 GFRA2O00451 464 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 KIAA0391O15091 583 aaKnown RBP7.68□□□□□ -1.18
ATXN3-219ENST00000553488 FLRT2O43155 660 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 CPNE3O75131 537 aaKnown RBP7.68□□□□□ -1.18
ATXN3-219ENST00000553488 NDUFS2O75306 463 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 PRPF6O94906 941 aaKnown RBP7.68□□□□□ -1.18
ATXN3-219ENST00000553488 CER1O95813 267 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 BMP15O95972 392 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 CST3P01034 146 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-219ENST00000553488 IGLV3-19P01714 112 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 PRB1P04280 392 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 FAM163BP0C2L3 166 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 IRF1P10914 325 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 NCAM1P13591 858 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 GJB2P29033 226 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 HOXD13P35453 343 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 GNL1P36915 607 aaPredicted RBP7.68□□□□□ -1.18
ATXN3-219ENST00000553488 SF3A1Q15459 793 aaKnown RBP7.68□□□□□ -1.18
ATXN3-219ENST00000553488 DUOXA2Q1HG44 320 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 FUT11Q495W5 492 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 SYCP2LQ5T4T6 812 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 KIAA1324Q6UXG2 1013 aaKnown RBP7.68□□□□□ -1.18
ATXN3-219ENST00000553488 HTR3DQ70Z44 454 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 TRAPPC11Q7Z392 1133 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 OR6B3Q8NGW1 331 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 NOC3LQ8WTT2 800 aaKnown RBP7.68□□□□□ -1.18
ATXN3-219ENST00000553488 TOE1Q96GM8 510 aaKnown RBP7.68□□□□□ -1.18
ATXN3-219ENST00000553488 DMRTB1Q96MA1 342 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 KCNK16Q96T55 309 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 MMS19Q96T76 1030 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 BBS2Q9BXC9 721 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 MKRN2Q9H000 416 aaKnown RBP7.68□□□□□ -1.18
ATXN3-219ENST00000553488 XYLT2Q9H1B5 865 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 SNX25Q9H3E2 840 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 GAREM1Q9H706 876 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 TM7SF3Q9NS93 570 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 FBXO10Q9UK96 956 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 BTBD3Q9Y2F9 522 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 KIF3AQ9Y496 699 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 PCDHGB2Q9Y5G2 931 aa7.68□□□□□ -1.18
ATXN3-219ENST00000553488 A0A087X0B3 334 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 TRABD2BA6NFA1 517 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 ZNF233A6NK53 670 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 METTL12A8MUP2 240 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 BCAT2O15382 392 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-219ENST00000553488 TLR5O60602 858 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 TBX18O95935 607 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 ESRRAP11474 423 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-219ENST00000553488 MATKP42679 507 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 IL12RB1P42701 662 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 GRIA4P48058 902 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 TPMTP51580 245 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 CYP4F3Q08477 520 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 SURF1Q15526 300 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 SMAD1Q15797 465 aaKnown RBP7.67□□□□□ -1.18
ATXN3-219ENST00000553488 HLA-BQ31612 363 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 DCAF12L1Q5VU92 463 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 SYCP3Q8IZU3 236 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 RBBP8NLQ8NC74 664 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-219ENST00000553488 CADM4Q8NFZ8 388 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 SETD7Q8WTS6 366 aaKnown RBP7.67□□□□□ -1.18
ATXN3-219ENST00000553488 SCFD1Q8WVM8 642 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 XPO6Q96QU8 1125 aaKnown RBP7.67□□□□□ -1.18
ATXN3-219ENST00000553488 CGRRF1Q99675 332 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 GPR174Q9BXC1 333 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 NRSN2Q9GZP1 204 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 NIF3L1Q9GZT8 377 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 SMYD3Q9H7B4 428 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 PRDM16Q9HAZ2 1276 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 DMAP1Q9NPF5 467 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-219ENST00000553488 ITM2CQ9NQX7 267 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 COMMD8Q9NX08 183 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 OSER1Q9NX31 292 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 HSPBP1Q9NZL4 362 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 THAP10Q9P2Z0 257 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-219ENST00000553488 CHORDC1Q9UHD1 332 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-219ENST00000553488 FBXO2Q9UK22 296 aaPredicted RBP7.67□□□□□ -1.18
ATXN3-219ENST00000553488 STON1Q9Y6Q2 735 aa7.67□□□□□ -1.18
ATXN3-219ENST00000553488 PIEZO2Q9H5I5 2752 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 DOCK9Q9BZ29 2069 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 A0A1B0GVT2 93 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 FAM149AA5PLN7 773 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 A8MXQ7 604 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 H3BQV1 296 aa7.66□□□□□ -1.18
ATXN3-219ENST00000553488 EIF1AYO14602 144 aaKnown RBP7.66□□□□□ -1.18
ATXN3-219ENST00000553488 EIF5BO60841 1220 aaKnown RBP7.66□□□□□ -1.18
ATXN3-219ENST00000553488 BEST1O76090 585 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms