RNA–Protein interactions for RNA: ENST00000553096.5

BEST3-212, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,929 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-212ENST00000553096 DGCR14Q96DF8 476 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 MAML3Q96JK9 1138 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 ZIC5Q96T25 663 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 MPHOSPH6Q99547 160 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 NIF3L1Q9GZT8 377 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 APOBEC2Q9Y235 224 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 TNFSF13BQ9Y275 285 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 TTLL3Q9Y4R7 772 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 A0A087WZ62 844 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 TCRBV7S3A2A0A539 114 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 ASB14A6NK59 587 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PRR5-ARHGAP8B1AHC4 643 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 B4GALT4O60513 344 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PDGFRBP09619 1106 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 HSPA8P11142 646 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 KRT3P12035 628 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 ACAT1P24752 427 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 PRDX6P30041 224 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 CPOXP36551 454 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 SLC26A2P50443 739 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 ARHGAP8P85298 464 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 BTKQ06187 659 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 DUOXA2Q1HG44 320 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 JADE1Q6IE81 842 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 DARS2Q6PI48 645 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 TMEM126BQ8IUX1 230 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 GPRC5AQ8NFJ5 357 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PPTC7Q8NI37 304 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 ACTRT2Q8TDY3 377 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 CMTM5Q96DZ9 223 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 ZFRQ96KR1 1074 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 CAPNS2Q96L46 248 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 TWNKQ96RR1 684 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PTPN18Q99952 460 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 LBHD1Q9BQE6 289 aaPredicted RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 FDXACB1Q9BRP7 624 aaPredicted RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 NFKBIZQ9BYH8 718 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 C2orf40Q9H1Z8 148 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 NRDE2Q9H7Z3 1164 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 PCDH18Q9HCL0 1135 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 XAB2Q9HCS7 855 aaKnown RBP7.55□□□□□ -1.2
BEST3-212ENST00000553096 ERAP1Q9NZ08 941 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 BCAP29Q9UHQ4 241 aa7.55□□□□□ -1.2
BEST3-212ENST00000553096 A0A0B4J203 849 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 LACTBL1A8MY62 500 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 STRNO43815 780 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 LRCH4O75427 683 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 ZFXP17010 805 aaPredicted RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 SMPD1P17405 629 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 VCLP18206 1134 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 ZNF157P51786 506 aaPredicted RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 CDH8P55286 799 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 PHEXP78562 749 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 PDK3Q15120 406 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 NOMO1Q15155 1222 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 SURF1Q15526 300 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 FAM187BQ17R55 369 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 ZNF699Q32M78 642 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 CYP4A22Q5TCH4 519 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 DENND1BQ6P3S1 775 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 FIP1L1Q6UN15 594 aaKnown RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 TIFABQ6ZNK6 161 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 LRRC49Q8IUZ0 686 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 CMASQ8NFW8 434 aaPredicted RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 PIWIL2Q8TC59 973 aaKnown RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 SPATA18Q8TC71 538 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 ACMSDQ8TDX5 336 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 SLC26A7Q8TE54 656 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 GDPD5Q8WTR4 605 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 IRGQQ8WZA9 623 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 GFM2Q969S9 779 aaKnown RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 EMID1Q96A84 441 aaPredicted RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 ACSF2Q96CM8 615 aaPredicted RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 SLC10A4Q96EP9 437 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 CFAP36Q96G28 342 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 CLPTM1LQ96KA5 538 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 BCO2Q9BYV7 579 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 GCOM2Q9BZD3 368 aaPredicted RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 KLC2Q9H0B6 622 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 LHX5Q9H2C1 402 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 SMYD3Q9H7B4 428 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 DNAJC28Q9NX36 388 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 THEGQ9P2T0 379 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 ZC3H7BQ9UGR2 993 aaKnown RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 MAD1L1Q9Y6D9 718 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 SLC30A1Q9Y6M5 507 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 RFPL1O75677 317 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 USP1O94782 785 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 ASLP04424 464 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 CCDC159P0C7I6 412 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 ARF4P18085 180 aaPredicted RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 MAGEA6P43360 314 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 RPL5P46777 297 aaKnown RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 YWHAZP63104 245 aaKnown RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 MRPS5P82675 430 aaKnown RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 HSF5Q4G112 596 aaPredicted RBP7.54□□□□□ -1.2
BEST3-212ENST00000553096 MDH1BQ5I0G3 518 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 PGM2L1Q6PCE3 622 aa7.54□□□□□ -1.2
BEST3-212ENST00000553096 IFNLR1Q8IU57 520 aaPredicted RBP7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms