RNA–Protein interactions for RNA: ENST00000552890.5

TRAFD1-208, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 2

Gene TRAFD1, Length 1,043 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-208ENST00000552890 CACNA1HO95180 2353 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 IGLV3-10A0A075B6K4 115 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 TCRBV5S1A1TA0A578 114 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 ZSCAN5CA6NGD5 496 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 RNF40O75150 1001 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 ADCY5O95622 1261 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 APBB3O95704 486 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 SRPRAP08240 638 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 KRT7P08729 469 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 DLDP09622 509 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 PABPC1P11940 636 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 HOXC13P31276 330 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 MAN1A1P33908 653 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 SLC1A1P43005 524 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 MAPKAPK2P49137 400 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 PLK1P53350 603 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 TCEAL1Q15170 157 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 CDO1Q16878 200 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 ODF2Q5BJF6 829 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 ERMARDQ5T6L9 678 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 TMCO4Q5TGY1 634 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 SCYL2Q6P3W7 929 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 FAM131BQ86XD5 332 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 GAS2L3Q86XJ1 694 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 CHPFQ8IZ52 775 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 LZTR1Q8N653 840 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 NAT16Q8N8M0 369 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 TMEM105Q8N8V8 129 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 USP33Q8TEY7 942 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 TEKT4Q8WW24 435 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 CHFRQ96EP1 664 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 PIWIL1Q96J94 861 aaKnown RBP10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 NUP85Q9BW27 656 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 SIK2Q9H0K1 926 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 ZWILCHQ9H900 591 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 PRMT8Q9NR22 394 aaPredicted RBP10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 ZSCAN32Q9NX65 697 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 EBF1Q9UH73 591 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 ANAPC7Q9UJX3 599 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 GGA2Q9UJY4 613 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 HS3ST4Q9Y661 456 aa10.59□□□□□ -0.71
TRAFD1-208ENST00000552890 A0A0A6YYK5 440 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 ILVBLA1L0T0 632 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 DRGXA6NNA5 263 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 E9PAM4 449 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 K7EQS6 105 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 DAPK3O43293 454 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 TSPAN3O60637 253 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 RNASEH1O60930 286 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 PDGFBP01127 241 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 EGFP01133 1207 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 PLEKP08567 350 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 CISD3P0C7P0 127 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 RHOQP17081 205 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 OR1E1P30953 314 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 ARL4AP40617 200 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 DPP6P42658 865 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 MAGEA1P43355 309 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 HCAR3P49019 387 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 MRE11P49959 708 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 GALCP54803 685 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 YBEYP58557 167 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 RPL7AP62424 266 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 KDSRQ06136 332 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 MTAPQ13126 283 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 ANGPT1Q15389 498 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 ASTE1Q2TB18 679 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 GAB4Q2WGN9 574 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 C2CD6Q53TS8 623 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 E4F1Q66K89 784 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 RAP1GAP2Q684P5 730 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 RETSATQ6NUM9 610 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 FBXL22Q6P050 247 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 KIAA0907Q7Z7F0 614 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 DSG4Q86SJ6 1040 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 LRRC49Q8IUZ0 686 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 CARNMT1Q8N4J0 409 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 EMC1Q8N766 993 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 TC2NQ8N9U0 490 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 TSTD1Q8NFU3 115 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 RPLP0P6Q8NHW5 317 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 ZNF564Q8TBZ8 553 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 CASKIN2Q8WXE0 1202 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 RFFLQ8WZ73 363 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 TBC1D31Q96DN5 1066 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 PRMT1Q99873 361 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 BAG1Q99933 345 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 CIPCQ9C0C6 399 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 MAGEH1Q9H213 219 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 TAS2R14Q9NYV8 317 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 PLK2Q9NYY3 685 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 RCOR3Q9P2K3 495 aaPredicted RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 MYO1AQ9UBC5 1043 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 SLC25A13Q9UJS0 675 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 RAB23Q9ULC3 237 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 VANGL2Q9ULK5 521 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 TPX2Q9ULW0 747 aaKnown RBP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 TBC1D30Q9Y2I9 924 aa10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.58□□□□□ -0.72
TRAFD1-208ENST00000552890 ZNF318Q5VUA4 2279 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms