RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 LETM1O95202 739 aaPredicted RBP12.31□□□□□ -0.44
CKAP4-202ENST00000552828 DNTTP04053 509 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 IGHV4-34P06331 123 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 VDRP11473 427 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 CD70P32970 193 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 CTSKP43235 329 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 GRK6P43250 576 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 FMO5P49326 533 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 SGSHP51688 502 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 DAOAP59103 153 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 YWHAEP62258 255 aaKnown RBP12.31□□□□□ -0.44
CKAP4-202ENST00000552828 CAMK2BQ13554 666 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 ARID5BQ14865 1188 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 SMAD1Q15797 465 aaKnown RBP12.31□□□□□ -0.44
CKAP4-202ENST00000552828 SKOR2Q2VWA4 1001 aaPredicted RBP12.31□□□□□ -0.44
CKAP4-202ENST00000552828 FAM133BQ5BKY9 247 aaKnown RBP12.31□□□□□ -0.44
CKAP4-202ENST00000552828 C19orf48Q6RUI8 117 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 LCLAT1Q6UWP7 414 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 USP30Q70CQ3 517 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 PDZD3Q86UT5 571 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 FAM114A1Q8IWE2 563 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 TRIM59Q8IWR1 403 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 UNC45BQ8IWX7 931 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 SIX6OS1Q8N1H7 587 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 GALNT15Q8N3T1 639 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 ZNF366Q8N895 744 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 KDM1BQ8NB78 822 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 UBA3Q8TBC4 463 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 WFDC5Q8TCV5 224 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 SLC35F5Q8WV83 523 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 IRGQQ8WZA9 623 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 SNX19Q92543 992 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 TTC17Q96AE7 1141 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 MYO19Q96H55 970 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 RSPH9Q9H1X1 276 aaPredicted RBP12.31□□□□□ -0.44
CKAP4-202ENST00000552828 THAP9Q9H5L6 903 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 SCML1Q9UN30 329 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.31□□□□□ -0.44
CKAP4-202ENST00000552828 PLXNB3Q9ULL4 1909 aa12.31□□□□□ -0.44
CKAP4-202ENST00000552828 PMM2O15305 246 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 P4HA2O15460 535 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 DFNA5O60443 496 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 PAEPP09466 180 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 CD19P15391 556 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 POLR2EP19388 210 aaKnown RBP12.3□□□□□ -0.44
CKAP4-202ENST00000552828 SLC11A2P49281 568 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 RACK1P63244 317 aaKnown RBP12.3□□□□□ -0.44
CKAP4-202ENST00000552828 KCNH2Q12809 1159 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 COL28A1Q2UY09 1125 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 TTC31Q49AM3 519 aaPredicted RBP12.3□□□□□ -0.44
CKAP4-202ENST00000552828 SOWAHCQ53LP3 525 aaPredicted RBP12.3□□□□□ -0.44
CKAP4-202ENST00000552828 KCNT1Q5JUK3 1230 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 NUGGCQ68CJ6 796 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 ZNF776Q68DI1 518 aaPredicted RBP12.3□□□□□ -0.44
CKAP4-202ENST00000552828 PMF1Q6P1K2 205 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 FIBINQ8TAL6 211 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 ENOX1Q8TC92 643 aaKnown RBP12.3□□□□□ -0.44
CKAP4-202ENST00000552828 PABPC3Q9H361 631 aaKnown RBP12.3□□□□□ -0.44
CKAP4-202ENST00000552828 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.3□□□□□ -0.44
CKAP4-202ENST00000552828 RAXQ9Y2V3 346 aa12.3□□□□□ -0.44
CKAP4-202ENST00000552828 MUC22E2RYF6 1773 aaPredicted RBP12.3□□□□□ -0.44
CKAP4-202ENST00000552828 GOLGA6L7A0A1B0GV03 622 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 H0Y8X5 98 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 VILLO15195 856 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 ACSL4O60488 711 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 TBL1XO60907 577 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 FSBPO95073 299 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 AFPP02771 609 aaKnown RBP12.29□□□□□ -0.44
CKAP4-202ENST00000552828 LCP1P13796 627 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 TBXAS1P24557 533 aaPredicted RBP12.29□□□□□ -0.44
CKAP4-202ENST00000552828 SLC6A4P31645 630 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 MTIF2P46199 727 aaKnown RBP12.29□□□□□ -0.44
CKAP4-202ENST00000552828 CCT8P50990 548 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 TYRO3Q06418 890 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 CNGA2Q16280 664 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 HNRNPA1L2Q32P51 320 aaKnown RBP12.29□□□□□ -0.44
CKAP4-202ENST00000552828 RFWD3Q6PCD5 774 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 IRF2BP1Q8IU81 584 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 TFAP2BQ92481 460 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 MRGPRX3Q96LB0 322 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 ZSWIM1Q9BR11 485 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 NAT10Q9H0A0 1025 aaKnown RBP12.29□□□□□ -0.44
CKAP4-202ENST00000552828 ADAMTS1Q9UHI8 967 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 ADAMTS20P59510 1910 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 CABIN1Q9Y6J0 2220 aa12.29□□□□□ -0.44
CKAP4-202ENST00000552828 A0A087WV48 116 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 A0A1B0GTQ1 180 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 A0A1W2PPC4 97 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 TRABD2BA6NFA1 517 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 E9PAM4 449 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 KCNK3O14649 394 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 LTFP02788 710 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 ASLP04424 464 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 FYNP06241 537 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 RPL34P49207 117 aaKnown RBP12.28□□□□□ -0.44
CKAP4-202ENST00000552828 GALCP54803 685 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 TBX4P57082 545 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 SFSWAPQ12872 951 aaKnown RBP12.28□□□□□ -0.44
CKAP4-202ENST00000552828 NNTQ13423 1086 aa12.28□□□□□ -0.44
CKAP4-202ENST00000552828 STILQ15468 1287 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms