RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 CXCR3P49682 368 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 LMNB2Q03252 620 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 LMAN2Q12907 356 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 PMS2CLQ68D20 193 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 CYB5D2Q8WUJ1 264 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 RLN3Q8WXF3 142 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 MRGPRX1Q96LB2 322 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 PCDHB18PQ96TA0 734 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 AGPAT1Q99943 283 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 ADAM33Q9BZ11 813 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 PLA2G4CQ9UP65 541 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 PCDHGA5Q9Y5G8 931 aa17.81■□□□□ 0.44
CHMP1A-208ENST00000550102 LRRC53A6NM62 1247 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 ZNF217O75362 1048 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 PAGE1O75459 146 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 ASLP04424 464 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 CALB1P05937 261 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 EPHX1P07099 455 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 RDXP35241 583 aaKnown RBP17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 GSCP56915 257 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 AUHQ13825 339 aaKnown RBP17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 MAP7D1Q3KQU3 841 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 TRNP1Q6NT89 227 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 KIAA1324Q6UXG2 1013 aaKnown RBP17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 CIR1Q86X95 450 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 PHF13Q86YI8 300 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 LMLNQ96KR4 655 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 CFAP57Q96MR6 1250 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 NAP1L5Q96NT1 182 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 RPRD1AQ96P16 312 aaPredicted RBP17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 WDCPQ9H6R7 721 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 SEMA4GQ9NTN9 838 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 ARHGEF38Q9NXL2 777 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 ADAM22Q9P0K1 906 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 HS3ST4Q9Y661 456 aa17.8■□□□□ 0.44
CHMP1A-208ENST00000550102 MAP3K13O43283 966 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 FOXD2O60548 495 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 MOCS3O95396 460 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 TGM1P22735 817 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 GGCXP38435 758 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 MPLP40238 635 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 CSKP41240 450 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 FANCCQ00597 558 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 PTP4A2Q12974 167 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 ASIC2Q16515 512 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 CSRP2Q16527 193 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 FSCBQ5H9T9 825 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 PITRM1Q5JRX3 1037 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 FBXL22Q6P050 247 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 MON1BQ7L1V2 547 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 LPCAT2Q7L5N7 544 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 CCAR2Q8N163 923 aaKnown RBP17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 EMC1Q8N766 993 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 TKTL2Q9H0I9 626 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 ARRDC1-AS1Q9H2J1 176 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 TMEM245Q9H330 911 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 PRDM16Q9HAZ2 1276 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 KIAA1522Q9P206 1035 aaPredicted RBP17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 VANGL2Q9ULK5 521 aa17.79■□□□□ 0.44
CHMP1A-208ENST00000550102 CACNA1AO00555 2505 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 PI4KAP42356 2102 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 ADCY5O95622 1261 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 HLA-EP13747 358 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 SDC4P31431 198 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 OXCT1P55809 520 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 ST8SIA6P61647 398 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 C1QBPQ07021 282 aaKnown RBP17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 CAMK2GQ13555 558 aaPredicted RBP17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 SLC12A1Q13621 1099 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 NR1I3Q14994 352 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 PTPRNQ16849 979 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 ACBD5Q5T8D3 534 aaPredicted RBP17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 PPP1R2P3Q6NXS1 205 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 SLC36A4Q6YBV0 504 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 PRR23CQ6ZRP0 262 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 CYP2U1Q7Z449 544 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 BNIPLQ7Z465 357 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 IRF2BP2Q7Z5L9 587 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 C3orf20Q8ND61 904 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 TTC17Q96AE7 1141 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 EDEM3Q9BZQ6 932 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 TTYH3Q9C0H2 523 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 SIK2Q9H0K1 926 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 SLC6A17Q9H1V8 727 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 FBRSQ9HAH7 460 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 MBD1Q9UIS9 605 aaPredicted RBP17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 INTS6Q9UL03 887 aaKnown RBP17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 LAMA1P25391 3075 aa17.78■□□□□ 0.44
CHMP1A-208ENST00000550102 IGHV1OR15-9A0A0B4J2B8 117 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 DHPSP49366 369 aaPredicted RBP17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 ATP11AP98196 1134 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 CREB5Q02930 508 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 PLEKHG6Q3KR16 790 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 FIGNQ5HY92 759 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 SFMBT2Q5VUG0 894 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 DNAJC24Q6P3W2 148 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 PHLDB2Q86SQ0 1253 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 ZNF366Q8N895 744 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 RXFP2Q8WXD0 754 aa17.77■□□□□ 0.44
CHMP1A-208ENST00000550102 IGSF8Q969P0 613 aa17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms