RNA–Protein interactions for RNA: ENST00000550077.1

AC055716.1-201, humanhuman

BASIC

Gene AC055716.1, Length 495 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055716.1-201ENST00000550077 PCDHA5Q9Y5H7 936 aa9.02□□□□□ -0.97
AC055716.1-201ENST00000550077 SRPRBQ9Y5M8 271 aaKnown RBP9.02□□□□□ -0.97
AC055716.1-201ENST00000550077 BSNQ9UPA5 3926 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 K7ENP7 123 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 FFAR2O15552 330 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 MSI1O43347 362 aaKnown RBP9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 CSO75390 466 aaKnown RBP9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 DXOO77932 396 aaKnown RBP9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 CYBBP04839 570 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 RALAP11233 206 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 VAV1P15498 845 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 ITGB6P18564 788 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 SLC8A1P32418 973 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 STAT6P42226 847 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 LSSP48449 732 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 ADPRHP54922 357 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 CLDN10P78369 228 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 KRT85P78386 507 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 SKOR1P84550 965 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 DNM1Q05193 864 aaKnown RBP9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 ZBTB16Q05516 673 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 ILKQ13418 452 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 TRIP4Q15650 581 aaPredicted RBP9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 TTC31Q49AM3 519 aaPredicted RBP9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 MPPE1Q53F39 396 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 FSCBQ5H9T9 825 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 ATL3Q6DD88 541 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 INO80CQ6PI98 192 aaPredicted RBP9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 USP30Q70CQ3 517 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 STK40Q8N2I9 435 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 OR2T34Q8NGX1 318 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 EDEM1Q92611 657 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 TMA16Q96EY4 203 aaKnown RBP9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 DCLK3Q9C098 648 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 SCAND2PQ9GZW5 306 aaPredicted RBP9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 SLCO3A1Q9UIG8 710 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 SATB2Q9UPW6 733 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 NCKAP1Q9Y2A7 1128 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 DOPEY2Q9Y3R5 2298 aa9.01□□□□□ -0.97
AC055716.1-201ENST00000550077 LATO43561 262 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 GADD45BO75293 160 aaPredicted RBP9□□□□□ -0.97
AC055716.1-201ENST00000550077 RTN2O75298 545 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 GABBR2O75899 941 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 CD58P19256 250 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 TGM2P21980 687 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 DGKAP23743 735 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 DRD3P35462 400 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 PSMD8P48556 350 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 ARRB1P49407 418 aaPredicted RBP9□□□□□ -0.97
AC055716.1-201ENST00000550077 CCR5P51681 352 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 YWHAGP61981 247 aaKnown RBP eCLIP9□□□□□ -0.97
AC055716.1-201ENST00000550077 C1QBPQ07021 282 aaKnown RBP9□□□□□ -0.97
AC055716.1-201ENST00000550077 ZNF211Q13398 564 aaPredicted RBP9□□□□□ -0.97
AC055716.1-201ENST00000550077 E2F4Q16254 413 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 HNRNPA1L2Q32P51 320 aaKnown RBP9□□□□□ -0.97
AC055716.1-201ENST00000550077 ZNF394Q53GI3 561 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 C3orf38Q5JPI3 329 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 C6orf132Q5T0Z8 1188 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 HIST2H2BCQ6DN03 193 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 UNC93AQ86WB7 457 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 CCDC65Q8IXS2 484 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 AHI1Q8N157 1196 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 OR14C36Q8NHC7 312 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 KLK6Q92876 244 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 ATXN7L3BQ96GX2 97 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 MYOCQ99972 504 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 OMDQ99983 421 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 DUSP16Q9BY84 665 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 ERVMER34-1Q9H9K5 563 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 POLR1BQ9H9Y6 1135 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 GRPEL1Q9HAV7 217 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 GDPD2Q9HCC8 539 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 STIM2Q9P246 746 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 SUN2Q9UH99 717 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 SARDHQ9UL12 918 aa9□□□□□ -0.97
AC055716.1-201ENST00000550077 ZFC3H1O60293 1989 aaKnown RBP8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 TBC1D3DA0A087WVF3 549 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 TBC1D3IA0A087WXS9 549 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 TBC1D3EA0A087X179 549 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 TBC1D3KA0A087X1G2 549 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 TBC1D3FA6NER0 549 aaPredicted RBP8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 TBC1D3LB9A6J9 549 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 RNF103O00237 685 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 EIF3DO15371 548 aaKnown RBP eCLIP8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 TBL1XO60907 577 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 NEBLO76041 1014 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 ASS1P00966 412 aaKnown RBP8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 HLA-DRAP01903 254 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 TBC1D3HP0C7X1 549 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 POLR2EP19388 210 aaKnown RBP8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 CSKP41240 450 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 PSEN1P49768 467 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 STK19P49842 368 aaPredicted RBP8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 UCNP55089 124 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 ERVPABLB-1P60509 514 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 RPS24P62847 133 aaKnown RBP8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 DAB2P98082 770 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 E2F1Q01094 437 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 INCA1Q0VD86 236 aa8.99□□□□□ -0.97
AC055716.1-201ENST00000550077 CLN3Q13286 438 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms