RNA–Protein interactions for RNA: ENST00000549580.1

SNRPF-202, Transcript of small nuclear ribonucleoprotein polypeptide F, humanhuman

TSL 2

Gene SNRPF, Length 757 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPF-202ENST00000549580 IL21RQ9HBE5 538 aa4.63□□□□□ -1.67
SNRPF-202ENST00000549580 KCTD5Q9NXV2 234 aa4.63□□□□□ -1.67
SNRPF-202ENST00000549580 EHD3Q9NZN3 535 aa4.63□□□□□ -1.67
SNRPF-202ENST00000549580 FOXJ2Q9P0K8 574 aa4.63□□□□□ -1.67
SNRPF-202ENST00000549580 RAB21Q9UL25 225 aa4.63□□□□□ -1.67
SNRPF-202ENST00000549580 TRPC5Q9UL62 973 aaPredicted RBP4.63□□□□□ -1.67
SNRPF-202ENST00000549580 ASAP1Q9ULH1 1129 aa4.63□□□□□ -1.67
SNRPF-202ENST00000549580 SLC12A4Q9UP95 1085 aa4.63□□□□□ -1.67
SNRPF-202ENST00000549580 SLC45A1Q9Y2W3 748 aa4.63□□□□□ -1.67
SNRPF-202ENST00000549580 CYP3A7-CYP3A51PA0A087WV96 503 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TBC1D3DA0A087WVF3 549 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TBC1D3IA0A087WXS9 549 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TBC1D3EA0A087X179 549 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TBC1D3KA0A087X1G2 549 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TBC1D3BA6NDS4 549 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TBC1D3FA6NER0 549 aaPredicted RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 AGAP5A6NIR3 686 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TBC1D3LB9A6J9 549 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 CA12O43570 354 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TMPRSS11DO60235 418 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 USO1O60763 962 aaKnown RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 RTN3O95197 1032 aaPredicted RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 DLDP09622 509 aaKnown RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TBC1D3HP0C7X1 549 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 ACP5P13686 325 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 IGFBP2P18065 325 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 CYP3A7P24462 503 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 ABCD3P28288 659 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 GRK5P34947 590 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 IGHMBP2P38935 993 aaKnown RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 RCAN1P53805 252 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 SUMO2P61956 95 aaKnown RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 E2F1Q01094 437 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 PRKG2Q13237 762 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 THOC5Q13769 683 aaKnown RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 BMPR2Q13873 1038 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TBC1D3GQ6DHY5 549 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TBC1D3CQ6IPX1 549 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 C16orf54Q6UWD8 224 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 PTCHD4Q6ZW05 846 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 PARS2Q7L3T8 475 aaKnown RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 P3H2Q8IVL5 708 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TBC1D3Q8IZP1 549 aaPredicted RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 SIRT6Q8N6T7 355 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 ANKRD44Q8N8A2 993 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 ANKRD52Q8NB46 1076 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 LSM14AQ8ND56 463 aaKnown RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 ZMIZ2Q8NF64 920 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TOR1AIP2Q8NFQ8 470 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 SPATA3Q8NHX4 192 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 RP9Q8TA86 221 aaKnown RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 UCMAQ8WVF2 138 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 SNRNP27Q8WVK2 155 aaKnown RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 XAGE5Q8WWM1 108 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 STAMQ92783 540 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 MASTLQ96GX5 879 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TAOK3Q9H2K8 898 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 CDCP1Q9H5V8 836 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 ASB6Q9NWX5 421 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 MGAT4CQ9UBM8 478 aa4.62□□□□□ -1.67
SNRPF-202ENST00000549580 TDRD9Q8NDG6 1382 aaKnown RBP4.62□□□□□ -1.67
SNRPF-202ENST00000549580 ANKRD18BA2A2Z9 1011 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 A6NCN8 305 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 PGPEP1LA6NFU8 196 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 K7ENM7 598 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 YY2O15391 372 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 MPPED1O15442 326 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 TIMM44O43615 452 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 DHX16O60231 1041 aaKnown RBP4.61□□□□□ -1.67
SNRPF-202ENST00000549580 MBPP02686 304 aaPredicted RBP4.61□□□□□ -1.67
SNRPF-202ENST00000549580 TMIGD3P0DMS9 266 aaPredicted RBP4.61□□□□□ -1.67
SNRPF-202ENST00000549580 TNNT1P13805 278 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 ZFXP17010 805 aaPredicted RBP4.61□□□□□ -1.67
SNRPF-202ENST00000549580 PGM1P36871 562 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 FOLR3P41439 243 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 TPTEP56180 551 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 TAS2R50P59544 299 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 BLOC1S1P78537 153 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 GALNT2Q10471 571 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 TBL3Q12788 808 aaKnown RBP4.61□□□□□ -1.67
SNRPF-202ENST00000549580 CBFBQ13951 182 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 TSTQ16762 297 aaKnown RBP4.61□□□□□ -1.67
SNRPF-202ENST00000549580 SLC45A4Q5BKX6 768 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 ZNF425Q6IV72 752 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 WDR93Q6P2C0 686 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 MTHFD1LQ6UB35 978 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 SYNE3Q6ZMZ3 975 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 Q6ZNX1 250 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 Q6ZWC4 215 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 FASTKD5Q7L8L6 764 aaKnown RBP4.61□□□□□ -1.67
SNRPF-202ENST00000549580 ARMC8Q8IUR7 673 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 CCDC89Q8N998 374 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 NGDNQ8NEJ9 315 aaKnown RBP4.61□□□□□ -1.67
SNRPF-202ENST00000549580 CLEC4CQ8WTT0 213 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 SLC9A6Q92581 669 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 ARRDC3Q96B67 414 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 RBM17Q96I25 401 aaKnown RBP4.61□□□□□ -1.67
SNRPF-202ENST00000549580 PBKQ96KB5 322 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 AIFM2Q9BRQ8 373 aa4.61□□□□□ -1.67
SNRPF-202ENST00000549580 THAP7Q9BT49 309 aaPredicted RBP4.61□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms