RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 GLI1P08151 1106 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 CHRNA3P32297 505 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 SLC7A5Q01650 507 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 DHX34Q14147 1143 aaKnown RBP20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 ZNF423Q2M1K9 1284 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 PKDCCQ504Y2 493 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 DCUN1D2Q6PH85 259 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 RAB44Q7Z6P3 723 aaPredicted RBP20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 RASSF3Q86WH2 238 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 CPNE8Q86YQ8 564 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 TTC9BQ8N6N2 239 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 STK32AQ8WU08 396 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 SEC14L1Q92503 715 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 BBC3Q96PG8 261 aaPredicted RBP20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 IL21Q9HBE4 155 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 CYTH4Q9UIA0 394 aa20.73■□□□□ 0.91
CTDSP2-204ENST00000548823 M0QYV0 167 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 PHF2O75151 1096 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 SOAT2O75908 522 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 ARSAP15289 507 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 ENGP17813 658 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 PAX3P23760 479 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 GJA4P35212 333 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 SNX16P57768 344 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 PDCLQ13371 301 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 CUL1Q13616 776 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 PHLDB2Q86SQ0 1253 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 XYLT1Q86Y38 959 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 EXD1Q8NHP7 514 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 IPO4Q8TEX9 1081 aaKnown RBP20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 EZH1Q92800 747 aaPredicted RBP20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 CPXM1Q96SM3 734 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 DDX47Q9H0S4 455 aaKnown RBP20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 EPB41L5Q9HCM4 733 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 PCYOX1Q9UHG3 505 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 CCL26Q9Y258 94 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 DENND4CQ5VZ89 1909 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 SASH3O75995 380 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 WARSP23381 471 aaKnown RBP20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 AVPR1AP37288 418 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 PSMC1P62191 440 aaKnown RBP20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 RPL7AP62424 266 aaKnown RBP20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 CASP8Q14790 479 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 VEPH1Q14D04 833 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 PDGFRLQ15198 375 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 NAIF1Q69YI7 327 aaPredicted RBP20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 SYT12Q8IV01 421 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 KRT222Q8N1A0 295 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 USP13Q92995 863 aaPredicted RBP20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 CAVIN3Q969G5 261 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 MCEEQ96PE7 176 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 LPIN3Q9BQK8 851 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 KIF9Q9HAQ2 790 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 CYLDQ9NQC7 956 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 TSPAN16Q9UKR8 245 aa20.72■□□□□ 0.91
CTDSP2-204ENST00000548823 TNFRSF10BO14763 440 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 MYBL2P10244 700 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 KRT3P12035 628 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 CETN2P41208 172 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 TUFMP49411 452 aaKnown RBP20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 AARSP49588 968 aaKnown RBP eCLIP20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 LILRA4P59901 499 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 COPS2P61201 443 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 GUCY2DQ02846 1103 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 ORC1Q13415 861 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 SLC23A3Q6PIS1 610 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 POLNQ7Z5Q5 900 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 HDDC3Q8N4P3 179 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 PRELID2Q8N945 189 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 KBTBD7Q8WVZ9 684 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 UBXN6Q9BZV1 441 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 ACBD3Q9H3P7 528 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 TDP1Q9NUW8 608 aa20.71■□□□□ 0.91
CTDSP2-204ENST00000548823 TNRC6BQ9UPQ9 1833 aaKnown RBP20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 PTPRDP23468 1912 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 GON4LQ3T8J9 2241 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 HUS1O60921 280 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 ERBB2P04626 1255 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 GNL1P36915 607 aaPredicted RBP20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 DPP6P42658 865 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 FNTAP49354 379 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 DRG2P55039 364 aaKnown RBP20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 TAS2R40P59535 323 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 HNRNPDQ14103 355 aaKnown RBP20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 SIX1Q15475 284 aaPredicted RBP20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 OVOS1Q6IE37 1185 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 ANO7Q6IWH7 933 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 LPCAT2Q7L5N7 544 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 RCOR2Q8IZ40 523 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 CPA6Q8N4T0 437 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 OR6B3Q8NGW1 331 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 SPATA18Q8TC71 538 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 SLC4A5Q9BY07 1137 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 RAB17Q9H0T7 212 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 SNX25Q9H3E2 840 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 CCDC86Q9H6F5 360 aaKnown RBP20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 LRRC19Q9H756 370 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 SYNCQ9H7C4 482 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 ECT2Q9H8V3 914 aa20.7■□□□□ 0.9
CTDSP2-204ENST00000548823 HOMER3Q9NSC5 361 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms