RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SERPINA13PQ6UXR4 307 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 ARCQ7LC44 396 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 ZNF571Q7Z3V5 609 aaPredicted RBP12.22□□□□□ -0.45
RAB5C-204ENST00000547517 ADIPOR2Q86V24 386 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 FAM131BQ86XD5 332 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 C3orf20Q8ND61 904 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 CPLX3Q8WVH0 158 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 RXFP2Q8WXD0 754 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 RUBCNQ92622 972 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 EDEM3Q9BZQ6 932 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 SIK2Q9H0K1 926 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 WDCPQ9H6R7 721 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 TMPRSS4Q9NRS4 437 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 ARHGEF38Q9NXL2 777 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 AIPL1Q9NZN9 384 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 THAP10Q9P2Z0 257 aaPredicted RBP12.22□□□□□ -0.45
RAB5C-204ENST00000547517 PAXBP1Q9Y5B6 917 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 SNX10Q9Y5X0 201 aa12.22□□□□□ -0.45
RAB5C-204ENST00000547517 A0A1B0GVM2 712 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 A0A1W2PQJ5 194 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 TCAF2A6NFQ2 919 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 C2CD4BA6NLJ0 364 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 I6L893 689 aaPredicted RBP12.21□□□□□ -0.45
RAB5C-204ENST00000547517 NPC1O15118 1278 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 ZBTB24O43167 697 aaPredicted RBP12.21□□□□□ -0.45
RAB5C-204ENST00000547517 ATMINO43313 823 aaPredicted RBP12.21□□□□□ -0.45
RAB5C-204ENST00000547517 TIMM44O43615 452 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 GYPCP04921 128 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 KRT3P12035 628 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 SKILP12757 684 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 PDGFRAP16234 1089 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 POLR2EP19388 210 aaKnown RBP12.21□□□□□ -0.45
RAB5C-204ENST00000547517 NDUFV2P19404 249 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 RRM1P23921 792 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 CSKP41240 450 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 NUMBP49757 651 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 CCDC14Q49A88 953 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 USP39Q53GS9 565 aaKnown RBP12.21□□□□□ -0.45
RAB5C-204ENST00000547517 RAB6CQ53S08 254 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 LAIR1Q6GTX8 287 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 BNIPLQ7Z465 357 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 KIAA0907Q7Z7F0 614 aaPredicted RBP12.21□□□□□ -0.45
RAB5C-204ENST00000547517 C14orf80Q86SX3 495 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 KBTBD6Q86V97 674 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 DNAAF5Q86Y56 855 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 MCOLN2Q8IZK6 566 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 CCAR2Q8N163 923 aaKnown RBP12.21□□□□□ -0.45
RAB5C-204ENST00000547517 DCLK2Q8N568 766 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 FAM160A2Q8N612 972 aaPredicted RBP12.21□□□□□ -0.45
RAB5C-204ENST00000547517 FIBINQ8TAL6 211 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 RLN3Q8WXF3 142 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 IGSF8Q969P0 613 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 LMLNQ96KR4 655 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 SPACA7Q96KW9 195 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 MCEEQ96PE7 176 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 RAB6CQ9H0N0 254 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 SLC6A17Q9H1V8 727 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 CD248Q9HCU0 757 aa12.21□□□□□ -0.45
RAB5C-204ENST00000547517 MYO18AQ92614 2054 aaKnown RBP12.2□□□□□ -0.46
RAB5C-204ENST00000547517 GPR179Q6PRD1 2367 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 ITIH6Q6UXX5 1313 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 DDX3XO00571 662 aaKnown RBP eCLIP12.2□□□□□ -0.467e-9■■■□□ 17.5
RAB5C-204ENST00000547517 CBFA2T2O43439 604 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 SYNCRIPO60506 623 aaKnown RBP12.2□□□□□ -0.46
RAB5C-204ENST00000547517 ATP5BP06576 529 aaKnown RBP12.2□□□□□ -0.46
RAB5C-204ENST00000547517 EPHX1P07099 455 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 DLDP09622 509 aaKnown RBP12.2□□□□□ -0.46
RAB5C-204ENST00000547517 HLA-EP13747 358 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 GPD1P21695 349 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 BCKDHBP21953 392 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 RFC1P35251 1148 aaPredicted RBP12.2□□□□□ -0.46
RAB5C-204ENST00000547517 ENPP2Q13822 863 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 E2F5Q15329 346 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 PTPRNQ16849 979 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 PITRM1Q5JRX3 1037 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 SH3PXD2AQ5TCZ1 1133 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 PPP1R2P3Q6NXS1 205 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 KIAA1324Q6UXG2 1013 aaKnown RBP12.2□□□□□ -0.46
RAB5C-204ENST00000547517 CACUL1Q86Y37 369 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 ZNF366Q8N895 744 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 FAM172AQ8WUF8 416 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 IQCDQ96DY2 449 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 KIAA1522Q9P206 1035 aaPredicted RBP12.2□□□□□ -0.46
RAB5C-204ENST00000547517 INTS6Q9UL03 887 aaKnown RBP12.2□□□□□ -0.46
RAB5C-204ENST00000547517 CAPN11Q9UMQ6 739 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 PLA2G4CQ9UP65 541 aa12.2□□□□□ -0.46
RAB5C-204ENST00000547517 FRYLO94915 3013 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 TCRBV5S1A1TA0A578 114 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 ANKRD62A6NC57 917 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 SIGLEC16A6NMB1 481 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 CCP110O43303 1012 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 MOCS3O95396 460 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 P2RY2P41231 377 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 PTPN9P43378 593 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 HDAC4P56524 1084 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 ZBED6P86452 979 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 ELF2Q15723 593 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 PLEKHG6Q3KR16 790 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 PLK5Q496M5 336 aa12.19□□□□□ -0.46
RAB5C-204ENST00000547517 CXorf57Q6NSI4 855 aaKnown RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms