RNA–Protein interactions for RNA: ENST00000546898.1

DDX54-204, Transcript of DEAD-box helicase 54, humanhuman

TSL 3

Gene DDX54, Length 479 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-204ENST00000546898 SEMA4GQ9NTN9 838 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 ARHGEF38Q9NXL2 777 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 CALCOCO1Q9P1Z2 691 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 PLA2G4CQ9UP65 541 aa16.43■□□□□ 0.22
DDX54-204ENST00000546898 H0Y626 953 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 GOLGA6L19H0YKK7 550 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 SYNCRIPO60506 623 aaKnown RBP16.42■□□□□ 0.22
DDX54-204ENST00000546898 PAGE1O75459 146 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 MOCS3O95396 460 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 BCKDHBP21953 392 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 OXCT1P55809 520 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 SLC12A1Q13621 1099 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 NR1I3Q14994 352 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 FNDC3BQ53EP0 1204 aaKnown RBP16.42■□□□□ 0.22
DDX54-204ENST00000546898 SPDYCQ5MJ68 293 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 PPP1R2P3Q6NXS1 205 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 BNIPLQ7Z465 357 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 METTL3Q86U44 580 aaKnown RBP16.42■□□□□ 0.22
DDX54-204ENST00000546898 LUZP1Q86V48 1076 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 CFAP52Q8N1V2 620 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 SLC30A5Q8TAD4 765 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 SORCS1Q8WY21 1168 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 TTC17Q96AE7 1141 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 MRGPRX1Q96LB2 322 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 NAP1L5Q96NT1 182 aaPredicted RBP16.42■□□□□ 0.22
DDX54-204ENST00000546898 RPRD1AQ96P16 312 aaPredicted RBP16.42■□□□□ 0.22
DDX54-204ENST00000546898 PCDHB18PQ96TA0 734 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 ADAM33Q9BZ11 813 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 EDEM3Q9BZQ6 932 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 ARRDC1-AS1Q9H2J1 176 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 WDCPQ9H6R7 721 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 FBRSQ9HAH7 460 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 SEPT11Q9NVA2 429 aaKnown RBP16.42■□□□□ 0.22
DDX54-204ENST00000546898 ADAM22Q9P0K1 906 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 KIAA1522Q9P206 1035 aaPredicted RBP16.42■□□□□ 0.22
DDX54-204ENST00000546898 INVSQ9Y283 1065 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 HS3ST4Q9Y661 456 aa16.42■□□□□ 0.22
DDX54-204ENST00000546898 FAM170AA1A519 330 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 LRRC53A6NM62 1247 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 PRR5-ARHGAP8B1AHC4 643 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 EPHX1P07099 455 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 TFE3P19532 575 aaPredicted RBP16.41■□□□□ 0.22
DDX54-204ENST00000546898 PRKCHP24723 683 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 RDXP35241 583 aaKnown RBP16.41■□□□□ 0.22
DDX54-204ENST00000546898 ARHGAP8P85298 464 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 C1QBPQ07021 282 aaKnown RBP16.41■□□□□ 0.22
DDX54-204ENST00000546898 PTP4A2Q12974 167 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 AUHQ13825 339 aaKnown RBP16.41■□□□□ 0.22
DDX54-204ENST00000546898 PTPRNQ16849 979 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 C5orf22Q49AR2 442 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 FIGNQ5HY92 759 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 TRNP1Q6NT89 227 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 FBXL22Q6P050 247 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 SLC36A4Q6YBV0 504 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 CCAR2Q8N163 923 aaKnown RBP16.41■□□□□ 0.22
DDX54-204ENST00000546898 KDM1BQ8NB78 822 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 CYB5D2Q8WUJ1 264 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 RLN3Q8WXF3 142 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 TTYH3Q9C0H2 523 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 TKTL2Q9H0I9 626 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 TMEM245Q9H330 911 aa16.41■□□□□ 0.22
DDX54-204ENST00000546898 MAP3K13O43283 966 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 ENDOD1O94919 500 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 ADCY5O95622 1261 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 SDC4P31431 198 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 MPLP40238 635 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 CSKP41240 450 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 PTPN9P43378 593 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 ST8SIA6P61647 398 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 FANCCQ00597 558 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 CAMK2GQ13555 558 aaPredicted RBP16.4■□□□□ 0.22
DDX54-204ENST00000546898 PLEKHG6Q3KR16 790 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 FSCBQ5H9T9 825 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 PITRM1Q5JRX3 1037 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 PLA2G2CQ5R387 149 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 KIAA1324Q6UXG2 1013 aaKnown RBP16.4■□□□□ 0.22
DDX54-204ENST00000546898 PRR23CQ6ZRP0 262 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 MON1BQ7L1V2 547 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 LPCAT2Q7L5N7 544 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 IRF2BP2Q7Z5L9 587 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 EMC1Q8N766 993 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 C3orf20Q8ND61 904 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 CFAP57Q96MR6 1250 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 PPP1R9BQ96SB3 815 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 PRDM16Q9HAZ2 1276 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 VPS45Q9NRW7 570 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 MBD1Q9UIS9 605 aaPredicted RBP16.4■□□□□ 0.22
DDX54-204ENST00000546898 INTS6Q9UL03 887 aaKnown RBP16.4■□□□□ 0.22
DDX54-204ENST00000546898 VANGL2Q9ULK5 521 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 PI4KAP42356 2102 aa16.4■□□□□ 0.22
DDX54-204ENST00000546898 IGHV1OR15-9A0A0B4J2B8 117 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 BCLAF3A2AJT9 711 aaKnown RBP16.39■□□□□ 0.21
DDX54-204ENST00000546898 AP5Z1O43299 807 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 CLDN11O75508 207 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 SRPRAP08240 638 aaKnown RBP16.39■□□□□ 0.21
DDX54-204ENST00000546898 ZNF806P0C7X5 589 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 C7P10643 843 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 HLA-EP13747 358 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 SDHBP21912 280 aa16.39■□□□□ 0.21
DDX54-204ENST00000546898 PRKCIP41743 596 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms