RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 WBP11Q9Y2W2 641 aaKnown RBP13.07□□□□□ -0.32
PTCH1-212ENST00000546744 RAP2CQ9Y3L5 183 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 PKP3Q9Y446 797 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 TCEA3O75764 348 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 VAC14Q08AM6 782 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 PPP1R15BQ5SWA1 713 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 IER5Q5VY09 327 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 THOC7Q6I9Y2 204 aaKnown RBP13.07□□□□□ -0.32
PTCH1-212ENST00000546744 POLNQ7Z5Q5 900 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 TBC1D21Q8IYX1 336 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 ABI1Q8IZP0 508 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 AHI1Q8N157 1196 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 TCAIMQ8N3R3 496 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 DCUN1D1Q96GG9 259 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 SPRTNQ9H040 489 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-212ENST00000546744 CCDC59Q9P031 241 aaKnown RBP13.07□□□□□ -0.32
PTCH1-212ENST00000546744 RCCD1A6NED2 376 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 ZBTB24O43167 697 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-212ENST00000546744 VPS26AO75436 327 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 NPR3P17342 541 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 GABRB2P47870 512 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 CD151P48509 253 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 ACOT2P49753 483 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 CMPK2Q5EBM0 449 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 RBM20Q5T481 1227 aaKnown RBP13.07□□□□□ -0.32
PTCH1-212ENST00000546744 SDE2Q6IQ49 451 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 PIK3C3Q8NEB9 887 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 ITFG1Q8TB96 612 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 MYDGFQ969H8 173 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 ZHX1-C8orf76Q96EF9 292 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 YTHDF1Q9BYJ9 559 aaKnown RBP13.07□□□□□ -0.32
PTCH1-212ENST00000546744 AGAP1Q9UPQ3 857 aa13.07□□□□□ -0.32
PTCH1-212ENST00000546744 PRG3Q9Y2Y8 225 aaPredicted RBP13.07□□□□□ -0.32
PTCH1-212ENST00000546744 CCDC182A6NF36 153 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 SLC22A2O15244 555 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 SLC37A4O43826 429 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 PGK2P07205 417 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 SNRPB2P08579 225 aaKnown RBP13.06□□□□□ -0.32
PTCH1-212ENST00000546744 NEK3P51956 506 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 CSE1LP55060 971 aaKnown RBP13.06□□□□□ -0.32
PTCH1-212ENST00000546744 TUBA3EQ6PEY2 450 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 SLC9A9Q8IVB4 645 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 TBC1D19Q8N5T2 526 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 RNFT2Q96EX2 444 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 AP5M1Q9H0R1 490 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 SERHL2Q9H4I8 314 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 ACAD9Q9H845 621 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 SERHLQ9NQF3 203 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 GPRC5DQ9NZD1 345 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 MEI4A8MW99 385 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 DFFAO00273 331 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 LRPAP1P30533 357 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 TUBA1BP68363 451 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 SLC25A3Q00325 362 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 QPRTQ15274 297 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 OTUD3Q5T2D3 398 aaPredicted RBP13.06□□□□□ -0.32
PTCH1-212ENST00000546744 TUBA1AQ71U36 451 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 TMC7Q7Z402 723 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 CYP4Z2PQ8N1L4 340 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 SLC20A1Q8WUM9 679 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 RIOX1Q9H6W3 641 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 TRMT6Q9UJA5 497 aaKnown RBP13.06□□□□□ -0.32
PTCH1-212ENST00000546744 SPATA2Q9UM82 520 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 OGTO15294 1046 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 IL6P05231 212 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 EIF4BP23588 611 aaKnown RBP13.06□□□□□ -0.32
PTCH1-212ENST00000546744 CDH17Q12864 832 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 BMPR2Q13873 1038 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 CNPY1Q3B7I2 92 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 EGFLAMQ63HQ2 1017 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 MZT2AQ6P582 158 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 KLHL17Q6TDP4 642 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 DEPDC4Q8N2C3 294 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 RAB42Q8N4Z0 105 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 ALLCQ8N6M5 410 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 TRMOQ9BU70 441 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 DNAAF2Q9NVR5 837 aaKnown RBP13.06□□□□□ -0.32
PTCH1-212ENST00000546744 PCDHB8Q9UN66 801 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 COQ6Q9Y2Z9 468 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 A0A087X1B8 175 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 FAM237BA0A1B0GVD1 139 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 KLRC4O43908 158 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 MED24O75448 989 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 TNFRSF21O75509 655 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 SLC26A3P40879 764 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 EMC2Q15006 297 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 ASIC4Q96FT7 647 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 RNF145Q96MT1 663 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 ZNF341Q9BYN7 854 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 MAGEE1Q9HCI5 957 aa13.06□□□□□ -0.32
PTCH1-212ENST00000546744 SLC2A3P11169 496 aa13.05□□□□□ -0.32
PTCH1-212ENST00000546744 ADORA2BP29275 332 aa13.05□□□□□ -0.32
PTCH1-212ENST00000546744 FBXO33Q7Z6M2 555 aa13.05□□□□□ -0.32
PTCH1-212ENST00000546744 HOPXQ9BPY8 73 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-212ENST00000546744 MTG1Q9BT17 334 aaPredicted RBP13.05□□□□□ -0.32
PTCH1-212ENST00000546744 RUSC1Q9BVN2 902 aa13.05□□□□□ -0.32
PTCH1-212ENST00000546744 TEX13BQ9BXU2 312 aa13.05□□□□□ -0.32
PTCH1-212ENST00000546744 CHST7Q9NS84 486 aa13.05□□□□□ -0.32
PTCH1-212ENST00000546744 ZNF221Q9UK13 617 aa13.05□□□□□ -0.32
PTCH1-212ENST00000546744 DNPEPQ9ULA0 475 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms