RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 PLK2Q9NYY3 685 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 ZMAT5Q9UDW3 170 aaKnown RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 BCAP29Q9UHQ4 241 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 RIPK3Q9Y572 518 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 ST14Q9Y5Y6 855 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 LINC00854A0A1B0GVQ3 168 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 A8MX80 341 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 PI4K2BG5E9Z4 385 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 H7C0C1 242 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 DNALI1O14645 258 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 PRPF4O43172 522 aaKnown RBP eCLIP8.08□□□□□ -1.12
UBR1-202ENST00000546274 B3GALNT1O75752 331 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 SULT1C4O75897 302 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 ATE1O95260 518 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 RPL10P27635 214 aaKnown RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 ATXN3P54252 364 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 IFITM2Q01629 132 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 NFX1Q12986 1120 aaKnown RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 CUL2Q13617 745 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 UBE2UQ5VVX9 321 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 TXNRD3NBQ6F5E7 133 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 ADGRG6Q86SQ4 1221 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 USP37Q86T82 979 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 TDRPQ86YL5 185 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 PPP1R14CQ8TAE6 165 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 DCPSQ96C86 337 aaKnown RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 ISOC1Q96CN7 298 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 MED30Q96HR3 178 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 VCPIP1Q96JH7 1222 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 TRIM56Q9BRZ2 755 aaKnown RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 KLC2Q9H0B6 622 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 C6orf203Q9P0P8 240 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 PRR5-ARHGAP8B1AHC4 643 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 CASQ2O14958 399 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 TLR3O15455 904 aaKnown RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 SEC24DO94855 1032 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 ITGBL1O95965 494 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 CES1P23141 567 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 GNA15P30679 374 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 ACOT2P49753 483 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 NDST2P52849 883 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 IRX4P78413 519 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 ARHGAP8P85298 464 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 OGDHQ02218 1023 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 C15orf59Q2T9L4 293 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 FGD3Q5JSP0 725 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 LDLRAP1Q5SW96 308 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 DRICH1Q6PGQ1 229 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 TMEM270Q6UE05 265 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 GPR141Q7Z602 305 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 VSIG10LQ86VR7 867 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 SNX29P2Q8IUI4 249 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 CCDC60Q8IWA6 550 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 BRSK2Q8IWQ3 736 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 UBR7Q8N806 425 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 RDM1Q8NG50 284 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 PMEPA1Q969W9 287 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 TTC17Q96AE7 1141 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 RPAP3Q9H6T3 665 aaPredicted RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 VPS37BQ9H9H4 285 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 SAYSD1Q9NPB0 183 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 SLC17A7Q9P2U7 560 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 SMG5Q9UPR3 1016 aaKnown RBP8.08□□□□□ -1.12
UBR1-202ENST00000546274 USTQ9Y2C2 406 aa8.08□□□□□ -1.12
UBR1-202ENST00000546274 TYROBPO43914 113 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 ATXN8OSP0DMR3 200 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 ZNF23P17027 643 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 GJC1P36383 396 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 ETFBP38117 255 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 ZNF132P52740 706 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 SLC18A1P54219 525 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 CDKL1Q00532 357 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 UBAP2LQ14157 1087 aaKnown RBP8.07□□□□□ -1.12
UBR1-202ENST00000546274 PPM1LQ5SGD2 360 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 RNASEH2BQ5TBB1 312 aaKnown RBP8.07□□□□□ -1.12
UBR1-202ENST00000546274 ARHGEF16Q5VV41 709 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 MFSD7Q6UXD7 560 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 HPS6Q86YV9 775 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 TTC13Q8NBP0 860 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 MTMR14Q8NCE2 650 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 FEZF2Q8TBJ5 459 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 TBC1D15Q8TC07 691 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 LPAR1Q92633 364 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 LRGUKQ96M69 825 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 POLR3FQ9H1D9 316 aaPredicted RBP8.07□□□□□ -1.12
UBR1-202ENST00000546274 NOL6Q9H6R4 1146 aaKnown RBP8.07□□□□□ -1.12
UBR1-202ENST00000546274 C10orf88Q9H8K7 445 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 MRPL47Q9HD33 250 aaKnown RBP8.07□□□□□ -1.12
UBR1-202ENST00000546274 CYP26B1Q9NR63 512 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 TAGLN3Q9UI15 199 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 CNTNAP2Q9UHC6 1331 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 TMEM191CA6NGB0 347 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 ARHGAP33O14559 1287 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 ATP2A1O14983 1001 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 DGAT1O75907 488 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 TMEM191BP0C7N4 346 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 MMP8P22894 467 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 WEE1P30291 646 aa8.07□□□□□ -1.12
UBR1-202ENST00000546274 ZNF135P52742 658 aaPredicted RBP8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms