RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 ACSL1P33121 698 aa8.8□□□□□ -1
USP28-215ENST00000545608 TBX4P57082 545 aa8.8□□□□□ -1
USP28-215ENST00000545608 ZNF445P59923 1031 aa8.8□□□□□ -1
USP28-215ENST00000545608 RPS14P62263 151 aaKnown RBP8.8□□□□□ -1
USP28-215ENST00000545608 KCNH2Q12809 1159 aa8.8□□□□□ -1
USP28-215ENST00000545608 HNRNPDQ14103 355 aaKnown RBP8.8□□□□□ -1
USP28-215ENST00000545608 TRIP6Q15654 476 aaKnown RBP8.8□□□□□ -1
USP28-215ENST00000545608 CCDC40Q4G0X9 1142 aa8.8□□□□□ -1
USP28-215ENST00000545608 FNDC3BQ53EP0 1204 aaKnown RBP8.8□□□□□ -1
USP28-215ENST00000545608 FAM133BQ5BKY9 247 aaKnown RBP8.8□□□□□ -1
USP28-215ENST00000545608 NADSYN1Q6IA69 706 aa8.8□□□□□ -1
USP28-215ENST00000545608 KLHL10Q6JEL2 608 aa8.8□□□□□ -1
USP28-215ENST00000545608 TTI2Q6NXR4 508 aa8.8□□□□□ -1
USP28-215ENST00000545608 EHBP1Q8NDI1 1231 aa8.8□□□□□ -1
USP28-215ENST00000545608 C1orf216Q8TAB5 229 aa8.8□□□□□ -1
USP28-215ENST00000545608 IRGQQ8WZA9 623 aa8.8□□□□□ -1
USP28-215ENST00000545608 LMLNQ96KR4 655 aa8.8□□□□□ -1
USP28-215ENST00000545608 HSFY1Q96LI6 401 aa8.8□□□□□ -1
USP28-215ENST00000545608 KREMEN1Q96MU8 473 aa8.8□□□□□ -1
USP28-215ENST00000545608 GTPBP4Q9BZE4 634 aaKnown RBP8.8□□□□□ -1
USP28-215ENST00000545608 ZDHHC5Q9C0B5 715 aa8.8□□□□□ -1
USP28-215ENST00000545608 MIS12Q9H081 205 aa8.8□□□□□ -1
USP28-215ENST00000545608 MTG2Q9H4K7 406 aa8.8□□□□□ -1
USP28-215ENST00000545608 C6orf106Q9H6K1 298 aaPredicted RBP8.8□□□□□ -1
USP28-215ENST00000545608 GAREM1Q9H706 876 aa8.8□□□□□ -1
USP28-215ENST00000545608 PRSS16Q9NQE7 514 aa8.8□□□□□ -1
USP28-215ENST00000545608 STIM2Q9P246 746 aa8.8□□□□□ -1
USP28-215ENST00000545608 PLA2G4CQ9UP65 541 aa8.8□□□□□ -1
USP28-215ENST00000545608 CEP295Q9C0D2 2601 aa8.79□□□□□ -1
USP28-215ENST00000545608 A0A1B0GVT2 93 aa8.79□□□□□ -1
USP28-215ENST00000545608 FAM221BA6H8Z2 402 aa8.79□□□□□ -1
USP28-215ENST00000545608 TMEM8BA6NDV4 472 aa8.79□□□□□ -1
USP28-215ENST00000545608 SRRM3A6NNA2 597 aaPredicted RBP8.79□□□□□ -1
USP28-215ENST00000545608 H0Y626 953 aa8.79□□□□□ -1
USP28-215ENST00000545608 P4HA2O15460 535 aa8.79□□□□□ -1
USP28-215ENST00000545608 CBFA2T3O75081 653 aa8.79□□□□□ -1
USP28-215ENST00000545608 TRIM16O95361 564 aa8.79□□□□□ -1
USP28-215ENST00000545608 DLDP09622 509 aaKnown RBP8.79□□□□□ -1
USP28-215ENST00000545608 POLR2EP19388 210 aaKnown RBP8.79□□□□□ -1
USP28-215ENST00000545608 RDXP35241 583 aaKnown RBP8.79□□□□□ -1
USP28-215ENST00000545608 GPD2P43304 727 aa8.79□□□□□ -1
USP28-215ENST00000545608 SLC11A2P49281 568 aa8.79□□□□□ -1
USP28-215ENST00000545608 CSNK1EP49674 416 aaKnown RBP8.79□□□□□ -1
USP28-215ENST00000545608 STX17P56962 302 aa8.79□□□□□ -1
USP28-215ENST00000545608 COPS2P61201 443 aa8.79□□□□□ -1
USP28-215ENST00000545608 RPS24P62847 133 aaKnown RBP8.79□□□□□ -1
USP28-215ENST00000545608 NUCB2P80303 420 aa8.79□□□□□ -1
USP28-215ENST00000545608 RING1Q06587 406 aa8.79□□□□□ -1
USP28-215ENST00000545608 STIM1Q13586 685 aa8.79□□□□□ -1
USP28-215ENST00000545608 STILQ15468 1287 aa8.79□□□□□ -1
USP28-215ENST00000545608 ZNF423Q2M1K9 1284 aa8.79□□□□□ -1
USP28-215ENST00000545608 HLA-BQ31612 363 aa8.79□□□□□ -1
USP28-215ENST00000545608 MPP7Q5T2T1 576 aa8.79□□□□□ -1
USP28-215ENST00000545608 TMCO4Q5TGY1 634 aa8.79□□□□□ -1
USP28-215ENST00000545608 NUGGCQ68CJ6 796 aa8.79□□□□□ -1
USP28-215ENST00000545608 NYAP1Q6ZVC0 841 aa8.79□□□□□ -1
USP28-215ENST00000545608 RAB44Q7Z6P3 723 aaPredicted RBP8.79□□□□□ -1
USP28-215ENST00000545608 SLCO6A1Q86UG4 719 aa8.79□□□□□ -1
USP28-215ENST00000545608 NAXDQ8IW45 347 aa8.79□□□□□ -1
USP28-215ENST00000545608 UNC45BQ8IWX7 931 aa8.79□□□□□ -1
USP28-215ENST00000545608 ELOA2Q8IYF1 753 aaPredicted RBP8.79□□□□□ -1
USP28-215ENST00000545608 AHI1Q8N157 1196 aa8.79□□□□□ -1
USP28-215ENST00000545608 PNPLA1Q8N8W4 532 aa8.79□□□□□ -1
USP28-215ENST00000545608 FIBINQ8TAL6 211 aa8.79□□□□□ -1
USP28-215ENST00000545608 DQX1Q8TE96 717 aaKnown RBP8.79□□□□□ -1
USP28-215ENST00000545608 NELFBQ8WX92 580 aa8.79□□□□□ -1
USP28-215ENST00000545608 ZCCHC14Q8WYQ9 949 aaKnown RBP8.79□□□□□ -1
USP28-215ENST00000545608 AZIN2Q96A70 460 aa8.79□□□□□ -1
USP28-215ENST00000545608 MYO19Q96H55 970 aa8.79□□□□□ -1
USP28-215ENST00000545608 FCRL2Q96LA5 508 aaPredicted RBP8.79□□□□□ -1
USP28-215ENST00000545608 PRICKLE1Q96MT3 831 aaPredicted RBP8.79□□□□□ -1
USP28-215ENST00000545608 SUN2Q9UH99 717 aa8.79□□□□□ -1
USP28-215ENST00000545608 HOOK1Q9UJC3 728 aaKnown RBP8.79□□□□□ -1
USP28-215ENST00000545608 INTS6Q9UL03 887 aaKnown RBP8.79□□□□□ -1
USP28-215ENST00000545608 NAALADL1Q9UQQ1 740 aa8.79□□□□□ -1
USP28-215ENST00000545608 FNDC3AQ9Y2H6 1198 aaKnown RBP8.79□□□□□ -1
USP28-215ENST00000545608 PCDHB9Q9Y5E1 797 aa8.79□□□□□ -1
USP28-215ENST00000545608 CEP192Q8TEP8 1941 aa8.79□□□□□ -1
USP28-215ENST00000545608 TAF4O00268 1085 aa8.78□□□□□ -1
USP28-215ENST00000545608 BIN1O00499 593 aa8.78□□□□□ -1
USP28-215ENST00000545608 KCNK3O14649 394 aa8.78□□□□□ -1
USP28-215ENST00000545608 IRAK2O43187 625 aa8.78□□□□□ -1
USP28-215ENST00000545608 FBXO21O94952 628 aa8.78□□□□□ -1
USP28-215ENST00000545608 SEMA4FO95754 770 aa8.78□□□□□ -1
USP28-215ENST00000545608 ATP5BP06576 529 aaKnown RBP8.78□□□□□ -1
USP28-215ENST00000545608 FTH1P19P0C7X4 201 aa8.78□□□□□ -1
USP28-215ENST00000545608 PPP1R2P41236 205 aa8.78□□□□□ -1
USP28-215ENST00000545608 MATKP42679 507 aa8.78□□□□□ -1
USP28-215ENST00000545608 RPL34P49207 117 aaKnown RBP8.78□□□□□ -1
USP28-215ENST00000545608 MMP16P51512 607 aa8.78□□□□□ -1
USP28-215ENST00000545608 GCNT1Q02742 428 aa8.78□□□□□ -1
USP28-215ENST00000545608 CETN1Q12798 172 aa8.78□□□□□ -1
USP28-215ENST00000545608 MORC3Q14149 939 aa8.78□□□□□ -1
USP28-215ENST00000545608 KIF19Q2TAC6 998 aa8.78□□□□□ -1
USP28-215ENST00000545608 FSCBQ5H9T9 825 aa8.78□□□□□ -1
USP28-215ENST00000545608 MS4A13Q5J8X5 152 aa8.78□□□□□ -1
USP28-215ENST00000545608 SYPL2Q5VXT5 272 aa8.78□□□□□ -1
USP28-215ENST00000545608 DENND1BQ6P3S1 775 aa8.78□□□□□ -1
USP28-215ENST00000545608 DBX2Q6ZNG2 339 aa8.78□□□□□ -1
USP28-215ENST00000545608 MMS22LQ6ZRQ5 1243 aa8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms