RNA–Protein interactions for RNA: ENST00000545584.1

CHD4-213, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 4

Gene CHD4, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-213ENST00000545584 OR6B2Q6IFH4 312 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 C11orf57Q6ZUT1 292 aaPredicted RBP20.58■□□□□ 0.89
CHD4-213ENST00000545584 DEFB106AQ8N104 65 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 WDTC1Q8N5D0 677 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 PCED1AQ9H1Q7 454 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 PDCL3Q9H2J4 239 aa20.58■□□□□ 0.89
CHD4-213ENST00000545584 XPO7Q9UIA9 1087 aaKnown RBP20.58■□□□□ 0.89
CHD4-213ENST00000545584 LAMA1P25391 3075 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 KCNU1A8MYU2 1149 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 CCR1P32246 355 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 SHC2P98077 582 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 SEMA3BQ13214 749 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 MTA1Q13330 715 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 TAF5Q15542 800 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 HSP90AA4PQ58FG1 418 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 CT47A1Q5JQC4 288 aaPredicted RBP20.57■□□□□ 0.88
CHD4-213ENST00000545584 SLC47A2Q86VL8 602 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 C1orf131Q8NDD1 294 aaKnown RBP20.57■□□□□ 0.88
CHD4-213ENST00000545584 MYEOVQ96EZ4 313 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 LMLNQ96KR4 655 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 SLC2A13Q96QE2 648 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 ZDHHC5Q9C0B5 715 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 DDIT4Q9NX09 232 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 ADAMTS9Q9P2N4 1935 aa20.57■□□□□ 0.88
CHD4-213ENST00000545584 ACACBO00763 2458 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 SYNJ2BP-COX16A0A087WUM0 186 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 UPK3BL1B0FP48 263 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 UPK3BL2E5RIL1 263 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 RNASEH1O60930 286 aaKnown RBP20.56■□□□□ 0.88
CHD4-213ENST00000545584 CLCN1P35523 988 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 RPS14P62263 151 aaKnown RBP20.56■□□□□ 0.88
CHD4-213ENST00000545584 PITX1P78337 314 aaPredicted RBP20.56■□□□□ 0.88
CHD4-213ENST00000545584 SFSWAPQ12872 951 aaKnown RBP20.56■□□□□ 0.88
CHD4-213ENST00000545584 RAPGEF1Q13905 1077 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 KCNJ12Q14500 433 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 PITRM1Q5JRX3 1037 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 TTC39BQ5VTQ0 682 aaPredicted RBP20.56■□□□□ 0.88
CHD4-213ENST00000545584 RNF219Q5W0B1 726 aaPredicted RBP20.56■□□□□ 0.88
CHD4-213ENST00000545584 ZNF776Q68DI1 518 aaPredicted RBP20.56■□□□□ 0.88
CHD4-213ENST00000545584 FAM183BPQ6ZVS7 135 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 FAM71AQ8IYT1 594 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 ZCCHC9Q8N567 271 aaKnown RBP20.56■□□□□ 0.88
CHD4-213ENST00000545584 KDM1BQ8NB78 822 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 BTBD1Q9H0C5 482 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 COX16Q9P0S2 106 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 AJAP1Q9UKB5 411 aaPredicted RBP20.56■□□□□ 0.88
CHD4-213ENST00000545584 INTS6Q9UL03 887 aaKnown RBP20.56■□□□□ 0.88
CHD4-213ENST00000545584 NCKAP1Q9Y2A7 1128 aa20.56■□□□□ 0.88
CHD4-213ENST00000545584 MUC22E2RYF6 1773 aaPredicted RBP20.55■□□□□ 0.88
CHD4-213ENST00000545584 BCAT2O15382 392 aaPredicted RBP20.55■□□□□ 0.88
CHD4-213ENST00000545584 GRAP2O75791 330 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 SRPRAP08240 638 aaKnown RBP20.55■□□□□ 0.88
CHD4-213ENST00000545584 C7P10643 843 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 FOXC1Q12948 553 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 DRAP1Q14919 205 aaPredicted RBP20.55■□□□□ 0.88
CHD4-213ENST00000545584 HNRNPA1L2Q32P51 320 aaKnown RBP20.55■□□□□ 0.88
CHD4-213ENST00000545584 FSCBQ5H9T9 825 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 MIIPQ5JXC2 388 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 RABGAP1LQ5R372 815 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 ZDHHC17Q8IUH5 632 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 TMEM35BQ8NCS4 154 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 GANCQ8TET4 914 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 SNX19Q92543 992 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 DNAAF2Q9NVR5 837 aaKnown RBP20.55■□□□□ 0.88
CHD4-213ENST00000545584 EIF2B4Q9UI10 523 aaKnown RBP20.55■□□□□ 0.88
CHD4-213ENST00000545584 SCML1Q9UN30 329 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 ERVW-1Q9UQF0 538 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 PCDH15Q96QU1 1955 aa20.55■□□□□ 0.88
CHD4-213ENST00000545584 SEMA4FO95754 770 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 ERBB2P04626 1255 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 PNMA6AP0CW24 399 aaPredicted RBP20.54■□□□□ 0.88
CHD4-213ENST00000545584 EEF1GP26641 437 aaKnown RBP20.54■□□□□ 0.88
CHD4-213ENST00000545584 ACSL1P33121 698 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 NNMTP40261 264 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 OXCT1P55809 520 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 SLC6A3Q01959 620 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 GRIK2Q13002 908 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 NME3Q13232 169 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 SLC14A1Q13336 389 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 EIF4EBP2Q13542 120 aaPredicted RBP20.54■□□□□ 0.88
CHD4-213ENST00000545584 SLC12A1Q13621 1099 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 OLFML1Q6UWY5 402 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 MMS22LQ6ZRQ5 1243 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 SLC26A9Q7LBE3 791 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 OR2I1PQ8NGU4 316 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 MYO19Q96H55 970 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 PPP1R9BQ96SB3 815 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 RSPH9Q9H1X1 276 aaPredicted RBP20.54■□□□□ 0.88
CHD4-213ENST00000545584 SGK2Q9HBY8 427 aa20.54■□□□□ 0.88
CHD4-213ENST00000545584 SAMSN1Q9NSI8 373 aaKnown RBP20.54■□□□□ 0.88
CHD4-213ENST00000545584 TARSL2A2RTX5 802 aaKnown RBP20.53■□□□□ 0.88
CHD4-213ENST00000545584 SIN3BO75182 1162 aa20.53■□□□□ 0.88
CHD4-213ENST00000545584 DAB1O75553 588 aa20.53■□□□□ 0.88
CHD4-213ENST00000545584 NOS2P35228 1153 aa20.53■□□□□ 0.88
CHD4-213ENST00000545584 ECT2LQ008S8 904 aa20.53■□□□□ 0.88
CHD4-213ENST00000545584 HNRNPDQ14103 355 aaKnown RBP20.53■□□□□ 0.88
CHD4-213ENST00000545584 PTPN20Q4JDL3 420 aa20.53■□□□□ 0.88
CHD4-213ENST00000545584 TCP11X2Q5H9J9 407 aa20.53■□□□□ 0.88
CHD4-213ENST00000545584 KLHDC7AQ5VTJ3 777 aa20.53■□□□□ 0.88
CHD4-213ENST00000545584 CLEC17AQ6ZS10 378 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms