RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 ZNF638Q14966 1978 aaKnown RBP15.44■□□□□ 0.06
USP28-214ENST00000545540 I6L893 689 aaPredicted RBP15.44■□□□□ 0.06
USP28-214ENST00000545540 AIM2O14862 343 aa15.44■□□□□ 0.06
USP28-214ENST00000545540 CFLARO15519 480 aa15.44■□□□□ 0.06
USP28-214ENST00000545540 MAP3K7CLP57077 242 aa15.44■□□□□ 0.06
USP28-214ENST00000545540 DPYSL2Q16555 572 aa15.44■□□□□ 0.06
USP28-214ENST00000545540 SLC9B1Q4ZJI4 515 aa15.44■□□□□ 0.06
USP28-214ENST00000545540 STRA8Q7Z7C7 330 aa15.44■□□□□ 0.06
USP28-214ENST00000545540 KBTBD7Q8WVZ9 684 aa15.44■□□□□ 0.06
USP28-214ENST00000545540 KCNN1Q92952 543 aa15.44■□□□□ 0.06
USP28-214ENST00000545540 SORT1Q99523 831 aa15.44■□□□□ 0.06
USP28-214ENST00000545540 ZNF180Q9UJW8 692 aa15.44■□□□□ 0.06
USP28-214ENST00000545540 PIN4Q9Y237 131 aaKnown RBP15.44■□□□□ 0.06
USP28-214ENST00000545540 PHGDHO43175 533 aaKnown RBP15.43■□□□□ 0.06
USP28-214ENST00000545540 TCN1P20061 433 aaPredicted RBP15.43■□□□□ 0.06
USP28-214ENST00000545540 MAGEA3P43357 314 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 HIC1Q14526 733 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 PPP4R1Q8TF05 950 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 RTP4Q96DX8 246 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 SGF29Q96ES7 293 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 PIGVQ9NUD9 493 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP28-214ENST00000545540 SCOCQ9UIL1 159 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 A0A0A0MRY4 1105 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 E7ENQ6 273 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 MDM4O15151 490 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 ZBTB14O43829 449 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 RALBP11234 206 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 CPOXP36551 454 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 MRPS35P82673 323 aaKnown RBP15.43■□□□□ 0.06
USP28-214ENST00000545540 ASPHQ12797 758 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 TUBB3Q13509 450 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 PAN2Q504Q3 1202 aaKnown RBP15.43■□□□□ 0.06
USP28-214ENST00000545540 TMEM198Q66K66 360 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 TAPT1Q6NXT6 567 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 SLC7A14Q8TBB6 771 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 RNF139Q8WU17 664 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 SPATA13Q96N96 652 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 OR52B2Q96RD2 323 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 TUBB6Q9BUF5 446 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 SNX25Q9H3E2 840 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 KLF11O14901 512 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 SERPINA6P08185 405 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 CCNFP41002 786 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 GRIK3Q13003 919 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 ITGA7Q13683 1181 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 NOL9Q5SY16 702 aaKnown RBP15.43■□□□□ 0.06
USP28-214ENST00000545540 C9orf57Q5W0N0 161 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 OR52E8Q6IFG1 317 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 QKIQ96PU8 341 aaKnown RBP eCLIP15.43■□□□□ 0.06
USP28-214ENST00000545540 MED10Q9BTT4 135 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 ATXN3LQ9H3M9 355 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 SNX15Q9NRS6 342 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 ADAMTS6Q9UKP5 1117 aa15.43■□□□□ 0.06
USP28-214ENST00000545540 DNAJC25-GNG10A0A024R161 153 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 A0A0G2JLL6 359 aaPredicted RBP15.42■□□□□ 0.06
USP28-214ENST00000545540 NRP1O14786 923 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 RNASEH1O60930 286 aaKnown RBP15.42■□□□□ 0.06
USP28-214ENST00000545540 PEX2P28328 305 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 EPHA3P29320 983 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 ACTR3P61158 418 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 WASHC5Q12768 1159 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 C6orf163Q5TEZ5 329 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 PDPK2PQ6A1A2 396 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 RPS27LQ71UM5 84 aaKnown RBP15.42■□□□□ 0.06
USP28-214ENST00000545540 PRRT2Q7Z6L0 340 aaPredicted RBP15.42■□□□□ 0.06
USP28-214ENST00000545540 SOX13Q9UN79 622 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 INPP5FQ9Y2H2 1132 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 PPME1Q9Y570 386 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 PTPRFP10586 1907 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.42■□□□□ 0.06
USP28-214ENST00000545540 TK2O00142 265 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 HNRNPCL1O60812 293 aaKnown RBP15.42■□□□□ 0.06
USP28-214ENST00000545540 CDC16Q13042 620 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 SEMA5AQ13591 1074 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 SFT2D3Q587I9 215 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 ARHGAP24Q8N264 748 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 MCUQ8NE86 351 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 DNAJB3Q8WWF6 145 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 USP13Q92995 863 aaPredicted RBP15.42■□□□□ 0.06
USP28-214ENST00000545540 CDCA5Q96FF9 252 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 OMDQ99983 421 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 COG4Q9H9E3 785 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 SLC39A10Q9ULF5 831 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 KPNA7A9QM74 516 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 TSHRP16473 764 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 FBXO47Q5MNV8 452 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 FSTL4Q6MZW2 842 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 MAMDC4Q6UXC1 1216 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 OSTM1Q86WC4 334 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 CDKL2Q92772 493 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 MPHOSPH6Q99547 160 aaKnown RBP15.42■□□□□ 0.06
USP28-214ENST00000545540 COPG2Q9UBF2 871 aa15.42■□□□□ 0.06
USP28-214ENST00000545540 MYOCOSA0A1B0GUC4 107 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 ZBTB24O43167 697 aaPredicted RBP15.41■□□□□ 0.06
USP28-214ENST00000545540 DYNC1LI2O43237 492 aaPredicted RBP15.41■□□□□ 0.06
USP28-214ENST00000545540 HSPA4LO95757 839 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 CPA3P15088 417 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 PKNOX1P55347 436 aa15.41■□□□□ 0.06
USP28-214ENST00000545540 BST2Q10589 180 aaKnown RBP15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms