RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 ASLP04424 464 aa23.47■■□□□ 1.35
CDKN3-207ENST00000543789 CSKP41240 450 aa23.47■■□□□ 1.35
CDKN3-207ENST00000543789 PMS1P54277 932 aaKnown RBP23.47■■□□□ 1.35
CDKN3-207ENST00000543789 GALCP54803 685 aa23.47■■□□□ 1.35
CDKN3-207ENST00000543789 IL9RQ01113 521 aa23.47■■□□□ 1.35
CDKN3-207ENST00000543789 SMAD1Q15797 465 aaKnown RBP23.47■■□□□ 1.35
CDKN3-207ENST00000543789 HNRNPA1L2Q32P51 320 aaKnown RBP23.47■■□□□ 1.35
CDKN3-207ENST00000543789 INAVAQ3KP66 663 aa23.47■■□□□ 1.35
CDKN3-207ENST00000543789 NADSYN1Q6IA69 706 aa23.47■■□□□ 1.35
CDKN3-207ENST00000543789 SKA1Q96BD8 255 aa23.47■■□□□ 1.35
CDKN3-207ENST00000543789 TYW5A2RUC4 315 aaKnown RBP23.46■■□□□ 1.35
CDKN3-207ENST00000543789 M0QYV0 167 aa23.46■■□□□ 1.35
CDKN3-207ENST00000543789 FBXO21O94952 628 aa23.46■■□□□ 1.35
CDKN3-207ENST00000543789 RPS24P62847 133 aaKnown RBP23.46■■□□□ 1.35
CDKN3-207ENST00000543789 CAMK2BQ13554 666 aa23.46■■□□□ 1.35
CDKN3-207ENST00000543789 STILQ15468 1287 aa23.46■■□□□ 1.35
CDKN3-207ENST00000543789 CCDC117Q8IWD4 279 aaPredicted RBP23.46■■□□□ 1.35
CDKN3-207ENST00000543789 DHX40Q8IX18 779 aaKnown RBP23.46■■□□□ 1.35
CDKN3-207ENST00000543789 CARNMT1Q8N4J0 409 aa23.46■■□□□ 1.35
CDKN3-207ENST00000543789 KDM1BQ8NB78 822 aa23.46■■□□□ 1.35
CDKN3-207ENST00000543789 CLEC4CQ8WTT0 213 aa23.46■■□□□ 1.35
CDKN3-207ENST00000543789 GSDMAQ96QA5 445 aa23.46■■□□□ 1.35
CDKN3-207ENST00000543789 ZSWIM1Q9BR11 485 aa23.46■■□□□ 1.35
CDKN3-207ENST00000543789 NEUROG2Q9H2A3 272 aa23.46■■□□□ 1.35
CDKN3-207ENST00000543789 FTSJ1Q9UET6 329 aa23.46■■□□□ 1.35
CDKN3-207ENST00000543789 INTS6Q9UL03 887 aaKnown RBP23.46■■□□□ 1.35
CDKN3-207ENST00000543789 KNL1Q8NG31 2342 aa23.45■■□□□ 1.35
CDKN3-207ENST00000543789 A0A1B0GTQ1 180 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 RNF225M0QZC1 329 aaPredicted RBP23.45■■□□□ 1.34
CDKN3-207ENST00000543789 FMO5P49326 533 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 LRRC63Q05C16 580 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 ARID5BQ14865 1188 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 CST6Q15828 149 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 C9orf64Q5T6V5 341 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 NCEH1Q6PIU2 408 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 DHRS13Q6UX07 377 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 PDCD7Q8N8D1 485 aaKnown RBP23.45■■□□□ 1.34
CDKN3-207ENST00000543789 LRIG1Q96JA1 1093 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 MRGPRX3Q96LB0 322 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 PRICKLE1Q96MT3 831 aaPredicted RBP23.45■■□□□ 1.34
CDKN3-207ENST00000543789 SLC6A18Q96N87 628 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 NT5C1BQ96P26 610 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 MIS12Q9H081 205 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 METTL14Q9HCE5 456 aaKnown RBP23.45■■□□□ 1.34
CDKN3-207ENST00000543789 SERGEFQ9UGK8 458 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 PLXNB3Q9ULL4 1909 aa23.45■■□□□ 1.34
CDKN3-207ENST00000543789 FASNP49327 2511 aaKnown RBP23.44■■□□□ 1.34
CDKN3-207ENST00000543789 A0A1W2PP55 124 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 TARSL2A2RTX5 802 aaKnown RBP23.44■■□□□ 1.34
CDKN3-207ENST00000543789 LRRC72A6NJI9 287 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 MID1O15344 667 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 BRD2P25440 801 aaKnown RBP23.44■■□□□ 1.34
CDKN3-207ENST00000543789 CDH18Q13634 790 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 MS4A13Q5J8X5 152 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 PRAMEF14Q5SWL7 426 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 MMAAQ8IVH4 418 aaKnown RBP23.44■■□□□ 1.34
CDKN3-207ENST00000543789 MYEOVQ96EZ4 313 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 FCRL2Q96LA5 508 aaPredicted RBP23.44■■□□□ 1.34
CDKN3-207ENST00000543789 SERPINB11Q96P15 392 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 OMDQ99983 421 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 GDPD2Q9HCC8 539 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 ERVW-1Q9UQF0 538 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 TLR6Q9Y2C9 796 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 NUMA1Q14980 2115 aa23.44■■□□□ 1.34
CDKN3-207ENST00000543789 NBEAQ8NFP9 2946 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 CELSR3Q9NYQ7 3312 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 TRIM49BA6NDI0 452 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 PMM2O15305 246 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 RNASEH2AO75792 299 aaKnown RBP23.43■■□□□ 1.34
CDKN3-207ENST00000543789 SMC2O95347 1197 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 FYNP06241 537 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 SRPRAP08240 638 aaKnown RBP23.43■■□□□ 1.34
CDKN3-207ENST00000543789 SLC8A1P32418 973 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 FSCBQ5H9T9 825 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 PITRM1Q5JRX3 1037 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 MMS22LQ6ZRQ5 1243 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 TMPRSS12Q86WS5 348 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 CFAP52Q8N1V2 620 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 PPM1KQ8N3J5 372 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 OR2T34Q8NGX1 318 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 DQX1Q8TE96 717 aaKnown RBP23.43■■□□□ 1.34
CDKN3-207ENST00000543789 ELF4Q99607 663 aaPredicted RBP23.43■■□□□ 1.34
CDKN3-207ENST00000543789 NUCKS1Q9H1E3 243 aaKnown RBP23.43■■□□□ 1.34
CDKN3-207ENST00000543789 EBF2Q9HAK2 575 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 ADAMTS1Q9UHI8 967 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 FZD4Q9ULV1 537 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 ADAMTS20P59510 1910 aa23.43■■□□□ 1.34
CDKN3-207ENST00000543789 TTC34A8MYJ7 566 aa23.42■■□□□ 1.34
CDKN3-207ENST00000543789 E9PAM4 449 aa23.42■■□□□ 1.34
CDKN3-207ENST00000543789 MOCS3O95396 460 aa23.42■■□□□ 1.34
CDKN3-207ENST00000543789 NNTQ13423 1086 aa23.42■■□□□ 1.34
CDKN3-207ENST00000543789 DCAF6Q58WW2 860 aa23.42■■□□□ 1.34
CDKN3-207ENST00000543789 GATAD2AQ86YP4 633 aa23.42■■□□□ 1.34
CDKN3-207ENST00000543789 SCUBE3Q8IX30 993 aa23.42■■□□□ 1.34
CDKN3-207ENST00000543789 FMR1NBQ8N0W7 255 aaPredicted RBP23.42■■□□□ 1.34
CDKN3-207ENST00000543789 KAT5Q92993 513 aa23.42■■□□□ 1.34
CDKN3-207ENST00000543789 SLC39A13Q96H72 371 aa23.42■■□□□ 1.34
CDKN3-207ENST00000543789 GTPBP4Q9BZE4 634 aaKnown RBP23.42■■□□□ 1.34
CDKN3-207ENST00000543789 AASDHPPTQ9NRN7 309 aa23.42■■□□□ 1.34
CDKN3-207ENST00000543789 NAALADL1Q9UQQ1 740 aa23.42■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms