RNA–Protein interactions for RNA: ENST00000543658.5

DDB1-223, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-223ENST00000543658 TMA16Q96EY4 203 aaKnown RBP12.26□□□□□ -0.45
DDB1-223ENST00000543658 CSPG4P5Q96PW8 444 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 PRMT1Q99873 361 aaKnown RBP12.26□□□□□ -0.45
DDB1-223ENST00000543658 TRMT61BQ9BVS5 477 aaKnown RBP12.26□□□□□ -0.45
DDB1-223ENST00000543658 BBS2Q9BXC9 721 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 OSBPL8Q9BZF1 889 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 BRD9Q9H8M2 597 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 PRDM16Q9HAZ2 1276 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 PRDM6Q9NQX0 595 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 CWC15Q9P013 229 aaKnown RBP12.26□□□□□ -0.45
DDB1-223ENST00000543658 IGSF9Q9P2J2 1179 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 TCF20Q9UGU0 1960 aaKnown RBP12.26□□□□□ -0.45
DDB1-223ENST00000543658 MYO10Q9HD67 2058 aa12.26□□□□□ -0.45
DDB1-223ENST00000543658 hCG_1818297A0A087WSY0 165 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 A0A1B0GVM2 712 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 TCAF2A6NFQ2 919 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 NEDD8-MDP1E9PL57 170 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 FAM72CH0Y354 149 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 H0Y626 953 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 I6L893 689 aaPredicted RBP12.25□□□□□ -0.45
DDB1-223ENST00000543658 PGRMC1O00264 195 aaKnown RBP12.25□□□□□ -0.45
DDB1-223ENST00000543658 CHADO15335 359 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 GREM1O60565 184 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 PYGMP11217 842 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 ADH5P11766 374 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 PRLRP16471 622 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 RHOQP17081 205 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 ERCC2P18074 760 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 PTPN7P35236 360 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 HCAR3P49019 387 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 ARSEP51690 589 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 CDH4P55283 916 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 DYNLT1P63172 113 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 GAD2Q05329 585 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 MMRN1Q13201 1228 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 SEMA3BQ13214 749 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 CDH18Q13634 790 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 HTR4Q13639 388 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 FAM72AQ5TYM5 149 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 DCAF12L1Q5VU92 463 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 FAM72DQ6L9T8 149 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 POTEHQ6S545 545 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 C14orf80Q86SX3 495 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 FAM72BQ86X60 149 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 CARNMT1Q8N4J0 409 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 RIN3Q8TB24 985 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 FAM71BQ8TC56 605 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 BHMTQ93088 406 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 RSPRY1Q96DX4 576 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 PRICKLE1Q96MT3 831 aaPredicted RBP12.25□□□□□ -0.45
DDB1-223ENST00000543658 RNF157Q96PX1 679 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 XPO6Q96QU8 1125 aaKnown RBP12.25□□□□□ -0.45
DDB1-223ENST00000543658 MAGEB5Q9BZ81 275 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 RETREG1Q9H6L5 497 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 SPHK2Q9NRA0 654 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 MPP6Q9NZW5 540 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 PRKAG3Q9UGI9 489 aa12.25□□□□□ -0.45
DDB1-223ENST00000543658 IGLV3-10A0A075B6K4 115 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.24□□□□□ -0.45
DDB1-223ENST00000543658 GOLGA6L10A0A0M3HER8 536 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 ANHXE9PGG2 379 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 CST8O60676 142 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 CLDN11O75508 207 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 RHOCP08134 193 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 AMPD1P23109 780 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 OR1E1P30953 314 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 HOXC13P31276 330 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 CDKN2BP42772 138 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 MAPKAPK2P49137 400 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 RPS24P62847 133 aaKnown RBP12.24□□□□□ -0.45
DDB1-223ENST00000543658 CKAP4Q07065 602 aaKnown RBP12.24□□□□□ -0.45
DDB1-223ENST00000543658 FCHO2Q0JRZ9 810 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 ZNF177Q13360 481 aaPredicted RBP12.24□□□□□ -0.45
DDB1-223ENST00000543658 TUBB2AQ13885 445 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 LLGL1Q15334 1064 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 LONRF2Q1L5Z9 754 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 EML3Q32P44 896 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 LY6G5CQ5SRR4 150 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 MPP7Q5T2T1 576 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 C6orf118Q5T5N4 469 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 MANEALQ5VSG8 457 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 TRIM68Q6AZZ1 485 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 BZW1Q7L1Q6 419 aaKnown RBP12.24□□□□□ -0.45
DDB1-223ENST00000543658 CHST9Q7L1S5 443 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 TFAP2DQ7Z6R9 452 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 CIR1Q86X95 450 aaPredicted RBP12.24□□□□□ -0.45
DDB1-223ENST00000543658 ZNF354CQ86Y25 554 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 MFN1Q8IWA4 741 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 CFAP52Q8N1V2 620 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 RTL3Q8N8U3 475 aaKnown RBP12.24□□□□□ -0.45
DDB1-223ENST00000543658 TTC13Q8NBP0 860 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 CHD5Q8TDI0 1954 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 IRF7Q92985 503 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 IGSF8Q969P0 613 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 FAF2Q96CS3 445 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 ZFYVE19Q96K21 471 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 CAPZA3Q96KX2 299 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 TUBB2BQ9BVA1 445 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 HEMGNQ9BXL5 484 aa12.24□□□□□ -0.45
DDB1-223ENST00000543658 EBF3Q9H4W6 596 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms