RNA–Protein interactions for RNA: ENST00000543473.1

SUDS3-204, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SUDS3, Length 4,897 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-204ENST00000543473 AKAP12Q02952 1782 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 KCNK1O00180 336 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 FANCGO15287 622 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 PSMD10O75832 226 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 FESP07332 822 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 STAG3L1P0CL83 205 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 ETFBP38117 255 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 CD151P48509 253 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 TAF6P49848 677 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 GTF2BQ00403 316 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 RGS21Q2M5E4 152 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 FAM98BQ52LJ0 330 aaKnown RBP19.77■□□□□ 0.76
SUDS3-204ENST00000543473 ZBTB45Q96K62 511 aaPredicted RBP19.77■□□□□ 0.76
SUDS3-204ENST00000543473 C1orf50Q9BV19 199 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 GLIS2Q9BZE0 524 aaPredicted RBP19.77■□□□□ 0.76
SUDS3-204ENST00000543473 KCNH4Q9UQ05 1017 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 ROBO3Q96MS0 1386 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 ERVK-10P10266 1014 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 CDH8P55286 799 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 POU6F1Q14863 301 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 NPNTQ6UXI9 565 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 BLOC1S5Q8TDH9 187 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 CLPTM1LQ96KA5 538 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 S100A14Q9HCY8 104 aa19.77■□□□□ 0.76
SUDS3-204ENST00000543473 RGPD8O14715 1765 aaPredicted RBP19.77■□□□□ 0.75
SUDS3-204ENST00000543473 BIRC5O15392 142 aa19.77■□□□□ 0.75
SUDS3-204ENST00000543473 CXCL8P10145 99 aa19.77■□□□□ 0.75
SUDS3-204ENST00000543473 ACO1P21399 889 aaKnown RBP19.77■□□□□ 0.75
SUDS3-204ENST00000543473 SOX6P35712 828 aa19.77■□□□□ 0.75
SUDS3-204ENST00000543473 RECQLP46063 649 aaPredicted RBP19.77■□□□□ 0.75
SUDS3-204ENST00000543473 CDH17Q12864 832 aa19.77■□□□□ 0.75
SUDS3-204ENST00000543473 ZNF618Q5T7W0 954 aa19.77■□□□□ 0.75
SUDS3-204ENST00000543473 BNIPLQ7Z465 357 aa19.77■□□□□ 0.75
SUDS3-204ENST00000543473 PQLC1Q8N2U9 271 aa19.77■□□□□ 0.75
SUDS3-204ENST00000543473 GRHL1Q9NZI5 618 aa19.77■□□□□ 0.75
SUDS3-204ENST00000543473 CLCN3P51790 818 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 FNIP1Q8TF40 1166 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 PPP1R10Q96QC0 940 aaKnown RBP19.76■□□□□ 0.75
SUDS3-204ENST00000543473 NOL6Q9H6R4 1146 aaKnown RBP19.76■□□□□ 0.75
SUDS3-204ENST00000543473 NCF1BA6NI72 391 aaPredicted RBP19.76■□□□□ 0.75
SUDS3-204ENST00000543473 SIGLEC16A6NMB1 481 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 NCF1CA8MVU1 366 aaPredicted RBP19.76■□□□□ 0.75
SUDS3-204ENST00000543473 PTGES3LE9PB15 166 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 ASNA1O43681 348 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 NCF1P14598 390 aaPredicted RBP19.76■□□□□ 0.75
SUDS3-204ENST00000543473 RAD51Q06609 339 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 ASTE1Q2TB18 679 aaPredicted RBP19.76■□□□□ 0.75
SUDS3-204ENST00000543473 PALB2Q86YC2 1186 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 GALNT15Q8N3T1 639 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 RORBQ92753 470 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 FICDQ9BVA6 458 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 APOL5Q9BWW9 433 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 IKZF4Q9H2S9 585 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 DMTF1Q9Y222 760 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 C2orf71A6NGG8 1288 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 ZNF862O60290 1169 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 GSNP06396 782 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 PCSK1P29120 753 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 DMPKQ09013 629 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 PGM5Q15124 567 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 LGALS13Q9UHV8 139 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 PSMD12O00232 456 aaPredicted RBP19.76■□□□□ 0.75
SUDS3-204ENST00000543473 F9P00740 461 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 PTGIRP43119 386 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 NOMO3P69849 1222 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 TAF5Q15542 800 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 BRSK2Q8IWQ3 736 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 SH3GL1Q99961 368 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 COMMD8Q9NX08 183 aa19.76■□□□□ 0.75
SUDS3-204ENST00000543473 CAPN8A6NHC0 703 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 GOLGA8TH3BQL2 631 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 NCAM2O15394 837 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 MAGEC1O60732 1142 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 MICAL2O94851 1124 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 HMBSP08397 361 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 LRPAP1P30533 357 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 PNPLA4P41247 253 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 ABCG1P45844 678 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 CACHD1Q5VU97 1274 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 RSBN1Q5VWQ0 802 aaPredicted RBP19.75■□□□□ 0.75
SUDS3-204ENST00000543473 PHF13Q86YI8 300 aaPredicted RBP19.75■□□□□ 0.75
SUDS3-204ENST00000543473 ACMSDQ8TDX5 336 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 CADM1Q9BY67 442 aaKnown RBP19.75■□□□□ 0.75
SUDS3-204ENST00000543473 EBF2Q9HAK2 575 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 CNGB3Q9NQW8 809 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 TRMT6Q9UJA5 497 aaKnown RBP19.75■□□□□ 0.75
SUDS3-204ENST00000543473 BARX2Q9UMQ3 279 aaPredicted RBP19.75■□□□□ 0.75
SUDS3-204ENST00000543473 UBQLN1Q9UMX0 589 aaKnown RBP19.75■□□□□ 0.75
SUDS3-204ENST00000543473 SERPINI2O75830 405 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 DCAF4L1Q3SXM0 396 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 MKL1Q969V6 931 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 VPS33AQ96AX1 596 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 APBA2Q99767 749 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 POLIQ9UNA4 740 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 AKT1P31749 480 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 NDST1P52848 882 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 TRIM25Q14258 630 aaKnown RBP19.75■□□□□ 0.75
SUDS3-204ENST00000543473 GIPC3Q8TF64 312 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 HSD17B14Q9BPX1 270 aa19.75■□□□□ 0.75
SUDS3-204ENST00000543473 ANKRD6Q9Y2G4 727 aa19.75■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms