RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 AOC2O75106 756 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 INMTO95050 263 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 GUCA1CO95843 209 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 SCGB1D2O95969 90 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 KRT16P08779 473 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 NCF1P14598 390 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 MMP13P45452 471 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 NR2C2P49116 596 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 CASP5P51878 434 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 MAPK10P53779 464 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 NCKAP1LP55160 1127 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ACAP2Q15057 778 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 TARBP2Q15633 366 aaKnown RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 LRRC23Q53EV4 343 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 RASIP1Q5U651 963 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 LRP10Q7Z4F1 713 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ANKRD52Q8NB46 1076 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 FBXO36Q8NEA4 188 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 HTR3CQ8WXA8 447 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ERLEC1Q96DZ1 483 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 VAT1Q99536 393 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 SH3GL3Q99963 347 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 CEP41Q9BYV8 373 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 PRKD2Q9BZL6 878 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 TMEM161AQ9NX61 479 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 THEGQ9P2T0 379 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 DMTF1Q9Y222 760 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 CDYLQ9Y232 598 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 PCDHA2Q9Y5H9 948 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 A0A087X0B3 334 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 TLR5O60602 858 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 FGF19O95750 216 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ADRB2P07550 413 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 SMPD1P17405 629 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 MIPP30301 263 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 GPC1P35052 558 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ALDH18A1P54886 795 aaKnown RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 NCALDP61601 193 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 MPP3Q13368 585 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 BOP1Q14137 746 aaKnown RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 DOK6Q6PKX4 331 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 DENND1CQ8IV53 801 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 TOP6BLQ8N6T0 577 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 HJURPQ8NCD3 748 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 GRIN3AQ8TCU5 1115 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 LENG1Q96BZ8 264 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 MAGEB10Q96LZ2 347 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 MRPL1Q9BYD6 325 aaKnown RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ECT2Q9H8V3 914 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 CERS4Q9HA82 394 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 FBRSQ9HAH7 460 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 GPAMQ9HCL2 828 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 PTPRHQ9HD43 1115 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 AVENQ9NQS1 362 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 CAPN6Q9Y6Q1 641 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 LTBP3Q9NS15 1303 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 LSM1O15116 133 aaKnown RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 KATNA1O75449 491 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 RPN2P04844 631 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 IL10P22301 178 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 SERPINB8P50452 374 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ZNF697Q5TEC3 545 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 GLT6D1Q7Z4J2 308 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 IFNEQ86WN2 208 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 SYTL1Q8IYJ3 562 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ARL6IP6Q8N6S5 226 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 OSCP1Q8WVF1 389 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 OTULINQ96BN8 352 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 MIR1-1HGQ9H1L0 117 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 FAM153AQ9UHL3 310 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 PNMA8BQ9ULN7 279 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 DTNAQ9Y4J8 743 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ABCC6O95255 1503 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ROBO3Q96MS0 1386 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 MAGEB16A2A368 324 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 TCP11X1B4DZS4 312 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 PSMD12O00232 456 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 DNAJC8O75937 253 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ADH1CP00326 375 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 SPATA31D3P0C874 917 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 RANBP1P43487 201 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 PSMD7P51665 324 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 HIRAP54198 1017 aaPredicted RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 KCNK10P57789 538 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 DDR2Q16832 855 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 LRIG3Q6UXM1 1119 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 SPATA31D4Q6ZUB0 917 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 CXorf40AQ8TE69 158 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 UTP15Q8TED0 518 aaKnown RBP7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 TRIM4Q9C037 500 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 ADAM21Q9UKJ8 722 aa7.05□□□□□ -1.28
SRGAP1-206ENST00000543397 SLIT2O94813 1529 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 IGF2BP3O00425 579 aaKnown RBP eCLIP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 GLRA3O75311 464 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 CCNE2O96020 404 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 OR56A5P0C7T3 313 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 RFX3P48380 749 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 ANXA11P50995 505 aaKnown RBP7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 DLG4P78352 724 aa7.04□□□□□ -1.28
SRGAP1-206ENST00000543397 DUSP4Q13115 394 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms