RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 GPSM3Q9Y4H4 160 aa16.1■□□□□ 0.17
CSF1R-209ENST00000543093 ANKRD11Q6UB99 2663 aaPredicted RBP16.1■□□□□ 0.17
CSF1R-209ENST00000543093 DMXL2Q8TDJ6 3036 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 GOLGA6L22H0YM25 854 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 GABBR2O75899 941 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 IGLV3-27P01718 113 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 SLC6A4P31645 630 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 MTIF2P46199 727 aaKnown RBP16.09■□□□□ 0.17
CSF1R-209ENST00000543093 GRIA4P48058 902 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 SLC11A2P49281 568 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 STILQ15468 1287 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 FAM133BQ5BKY9 247 aaKnown RBP16.09■□□□□ 0.17
CSF1R-209ENST00000543093 MPP7Q5T2T1 576 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 NUGGCQ68CJ6 796 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 ZNF776Q68DI1 518 aaPredicted RBP16.09■□□□□ 0.17
CSF1R-209ENST00000543093 PMF1Q6P1K2 205 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 TMPRSS7Q7RTY8 843 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 UNC45BQ8IWX7 931 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 IRGQQ8WZA9 623 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 MED15Q96RN5 788 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 SGK2Q9HBY8 427 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 STIM2Q9P246 746 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 SUN2Q9UH99 717 aa16.09■□□□□ 0.17
CSF1R-209ENST00000543093 NYNRINQ9P2P1 1898 aaKnown RBP16.09■□□□□ 0.17
CSF1R-209ENST00000543093 DSPP15924 2871 aaKnown RBP16.08■□□□□ 0.16
CSF1R-209ENST00000543093 M0QYV0 167 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 IRAK2O43187 625 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 ACSL4O60488 711 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 CD27P26842 260 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 TBX4P57082 545 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 TRIM65Q6PJ69 517 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 MARCH9Q86YJ5 346 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 MFN1Q8IWA4 741 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 GANCQ8TET4 914 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 CLEC4CQ8WTT0 213 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 SLC35F5Q8WV83 523 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 GOLGA1Q92805 767 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 FAM81BQ96LP2 452 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 ZSWIM1Q9BR11 485 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 IRX2Q9BZI1 471 aaPredicted RBP16.08■□□□□ 0.16
CSF1R-209ENST00000543093 THAP9Q9H5L6 903 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 NCKAP1Q9Y2A7 1128 aa16.08■□□□□ 0.16
CSF1R-209ENST00000543093 H0Y8X5 98 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 RNF225M0QZC1 329 aaPredicted RBP16.07■□□□□ 0.16
CSF1R-209ENST00000543093 DKK1O94907 266 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 CALCAP01258 141 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 LTFP02788 710 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 KRT5P13647 590 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 BRD2P25440 801 aaKnown RBP16.07■□□□□ 0.16
CSF1R-209ENST00000543093 ERCC5P28715 1186 aaPredicted RBP16.07■□□□□ 0.16
CSF1R-209ENST00000543093 GRK6P43250 576 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 CCT8P50990 548 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 ST8SIA6P61647 398 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 IL9RQ01113 521 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 CNGA2Q16280 664 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 COL28A1Q2UY09 1125 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 CCDC157Q569K6 752 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 KCNT1Q5JUK3 1230 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 KIAA0895LQ68EN5 471 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 NADSYN1Q6IA69 706 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 GBP6Q6ZN66 633 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 ENOSF1Q7L5Y1 443 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 ADAT2Q7Z6V5 191 aaKnown RBP16.07■□□□□ 0.16
CSF1R-209ENST00000543093 ZNF557Q8N988 423 aaPredicted RBP16.07■□□□□ 0.16
CSF1R-209ENST00000543093 HJURPQ8NCD3 748 aaPredicted RBP16.07■□□□□ 0.16
CSF1R-209ENST00000543093 IGSF8Q969P0 613 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 TTC17Q96AE7 1141 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 MYO19Q96H55 970 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 LMLNQ96KR4 655 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 PRICKLE1Q96MT3 831 aaPredicted RBP16.07■□□□□ 0.16
CSF1R-209ENST00000543093 KREMEN1Q96MU8 473 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 ORAI3Q9BRQ5 295 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 CRACR2AQ9BSW2 395 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 MIS12Q9H081 205 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 RSPH9Q9H1X1 276 aaPredicted RBP16.07■□□□□ 0.16
CSF1R-209ENST00000543093 PABPC3Q9H361 631 aaKnown RBP16.07■□□□□ 0.16
CSF1R-209ENST00000543093 UBE2TQ9NPD8 197 aaPredicted RBP16.07■□□□□ 0.16
CSF1R-209ENST00000543093 KNL1Q8NG31 2342 aa16.07■□□□□ 0.16
CSF1R-209ENST00000543093 CABIN1Q9Y6J0 2220 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 GTPBP10A4D1E9 387 aaKnown RBP16.06■□□□□ 0.16
CSF1R-209ENST00000543093 FAM47DPA6NHR8 397 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 SIN3BO75182 1162 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 IGHV4-34P06331 123 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 CSKP41240 450 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 CTSKP43235 329 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 RPS24P62847 133 aaKnown RBP16.06■□□□□ 0.16
CSF1R-209ENST00000543093 ACAP1Q15027 740 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 MAN2A1Q16706 1144 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 USP30Q70CQ3 517 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 PDZD3Q86UT5 571 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 IRF2BP1Q8IU81 584 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 DHX40Q8IX18 779 aaKnown RBP16.06■□□□□ 0.16
CSF1R-209ENST00000543093 CARNMT1Q8N4J0 409 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 FIBINQ8TAL6 211 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 AZIN2Q96A70 460 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 MYEOVQ96EZ4 313 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 FCRL2Q96LA5 508 aaPredicted RBP16.06■□□□□ 0.16
CSF1R-209ENST00000543093 DDX50Q9BQ39 737 aaKnown RBP16.06■□□□□ 0.16
CSF1R-209ENST00000543093 FBXL12Q9NXK8 326 aa16.06■□□□□ 0.16
CSF1R-209ENST00000543093 APEX2Q9UBZ4 518 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms