RNA–Protein interactions for RNA: ENST00000542817.1

NPIPB3-210, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

TSL 5 BASIC

Gene NPIPB3, Length 1,342 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-210ENST00000542817 NYAP1Q6ZVC0 841 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 CHSY1Q86X52 802 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 CIR1Q86X95 450 aaPredicted RBP11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 RHOT1Q8IXI2 618 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 KATNAL2Q8IYT4 538 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 LGI2Q8N0V4 545 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 ZNF687Q8N1G0 1237 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 SLC35F6Q8N357 371 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 PHTF2Q8N3S3 785 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 PQLC3Q8N755 202 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 TTC8Q8TAM2 541 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 HSPH1Q92598 858 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 CSPG4P5Q96PW8 444 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 DHX35Q9H5Z1 703 aaKnown RBP11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 NOL6Q9H6R4 1146 aaKnown RBP11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 FBRSL1Q9HCM7 1045 aaKnown RBP11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 ETNK2Q9NVF9 386 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 PLK2Q9NYY3 685 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 MPP6Q9NZW5 540 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 PPARGC1AQ9UBK2 798 aaKnown RBP11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 DUSP12Q9UNI6 340 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 MFHAS1Q9Y4C4 1052 aa11.02□□□□□ -0.65
NPIPB3-210ENST00000542817 DOCK4Q8N1I0 1966 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 UQCRHLA0A096LP55 91 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 WASH4PA8MWX3 477 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 PI4K2BG5E9Z4 385 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 SLC9A3R1O14745 358 aaPredicted RBP11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 DCLK1O15075 740 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 SPOPO43791 374 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 UQCRHP07919 91 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 KRT7P08729 469 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 PYGMP11217 842 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 KDELR1P24390 212 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 GJA4P35212 333 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 CHKAP35790 457 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 OPRD1P41143 372 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 CDKN2BP42772 138 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 SLC6A11P48066 632 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 IFNAR2P48551 515 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 HCAR3P49019 387 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 MTA1Q13330 715 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 IFI16Q16666 785 aaKnown RBP11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 HADHQ16836 314 aaKnown RBP11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 EFHC2Q5JST6 749 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 ZNF569Q5MCW4 686 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 MPP7Q5T2T1 576 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 MFSD7Q6UXD7 560 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 PEX26Q7Z412 305 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 SFTPA1Q8IWL2 248 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 GJD3Q8N144 294 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 MYRIPQ8NFW9 859 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 TRIM58Q8NG06 486 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 PCDH19Q8TAB3 1148 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 EZH1Q92800 747 aaPredicted RBP11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 ATP2A3Q93084 1043 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 BHMTQ93088 406 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 ALG14Q96F25 216 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 ARHGEF4Q9NR80 690 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 THG1LQ9NWX6 298 aaKnown RBP11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 SLC12A6Q9UHW9 1150 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 MUTYHQ9UIF7 546 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 AMFRQ9UKV5 643 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 HCN2Q9UL51 889 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 OR51B4Q9Y5P0 310 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 DMDP11532 3685 aa11.01□□□□□ -0.65
NPIPB3-210ENST00000542817 TICRRQ7Z2Z1 1910 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 CCDC66A2RUB6 948 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 ZNF487B1APH4 448 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 F5H5T6 163 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 CACNG3O60359 315 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 TBL1XO60907 577 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 SRGAP2O75044 1071 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 NFATC1O95644 943 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 ADH5P11766 374 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 TNNT1P13805 278 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 TYRP14679 529 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 GJC1P36383 396 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 SSR1P43307 286 aaKnown RBP11□□□□□ -0.65
NPIPB3-210ENST00000542817 CDH6P55285 790 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 ITPRIPL2Q3MIP1 535 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 MPPE1Q53F39 396 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 PPP6R3Q5H9R7 873 aaPredicted RBP11□□□□□ -0.65
NPIPB3-210ENST00000542817 ACBD5Q5T8D3 534 aaPredicted RBP11□□□□□ -0.65
NPIPB3-210ENST00000542817 AFMIDQ63HM1 303 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 RFX8Q6ZV50 586 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 KIAA0907Q7Z7F0 614 aaPredicted RBP11□□□□□ -0.65
NPIPB3-210ENST00000542817 VSIG1Q86XK7 387 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 TP53INP2Q8IXH6 220 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 YAF2Q8IY57 180 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 SYCE1Q8N0S2 351 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 NPWQ8N729 165 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 NETO2Q8NC67 525 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 DNASE1L2Q92874 299 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 TMA16Q96EY4 203 aaKnown RBP11□□□□□ -0.65
NPIPB3-210ENST00000542817 RPRD1AQ96P16 312 aaPredicted RBP11□□□□□ -0.65
NPIPB3-210ENST00000542817 BRD9Q9H8M2 597 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 INTS6Q9UL03 887 aaKnown RBP11□□□□□ -0.65
NPIPB3-210ENST00000542817 TBC1D30Q9Y2I9 924 aa11□□□□□ -0.65
NPIPB3-210ENST00000542817 CHD5Q8TDI0 1954 aa10.99□□□□□ -0.65
NPIPB3-210ENST00000542817 KRBA1A5PL33 1030 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms