RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 SLC12A6Q9UHW9 1150 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 SHOC2Q9UQ13 582 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 E9PAM4 449 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 RNF40O75150 1001 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 GCATO75600 419 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 ACSL3O95573 720 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 VEPH1Q14D04 833 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 TRIP4Q15650 581 aaPredicted RBP11.34□□□□□ -0.59
SCG3-202ENST00000542355 KYNUQ16719 465 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 HP1BP3Q5SSJ5 553 aaPredicted RBP11.34□□□□□ -0.59
SCG3-202ENST00000542355 PIK3R6Q5UE93 754 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 TRMT10CQ7L0Y3 403 aaKnown RBP11.34□□□□□ -0.59
SCG3-202ENST00000542355 DNAJB7Q7Z6W7 309 aaPredicted RBP11.34□□□□□ -0.59
SCG3-202ENST00000542355 PDZD8Q8NEN9 1154 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 PHOSPHO2Q8TCD6 241 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 ARL8AQ96BM9 186 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 C1orf74Q96LT6 269 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 C9orf72Q96LT7 481 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 FOXP3Q9BZS1 431 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 NACA2Q9H009 215 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 RXFP1Q9HBX9 757 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 ALG13Q9NP73 1137 aaKnown RBP11.34□□□□□ -0.59
SCG3-202ENST00000542355 SEPT10Q9P0V9 454 aa11.34□□□□□ -0.59
SCG3-202ENST00000542355 PATJQ8NI35 1801 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.33□□□□□ -0.6
SCG3-202ENST00000542355 C5orf60A6NFR6 353 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 TGM5O43548 720 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 TMEM63AO94886 807 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 METTL18O95568 372 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 SERPINB6P35237 376 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 ATP5C1P36542 298 aaKnown RBP11.33□□□□□ -0.6
SCG3-202ENST00000542355 ZNF844Q08AG5 666 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 PLD1Q13393 1074 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 MTM1Q13496 603 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 PRKD1Q15139 912 aaPredicted RBP11.33□□□□□ -0.6
SCG3-202ENST00000542355 MS4A13Q5J8X5 152 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 HOOK3Q86VS8 718 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 TCEAL8Q8IYN2 117 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 ATP6V0D2Q8N8Y2 350 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 TBC1D31Q96DN5 1066 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 BTN2A3PQ96KV6 586 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 MYRFLQ96LU7 910 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 LBHD1Q9BQE6 289 aaPredicted RBP11.33□□□□□ -0.6
SCG3-202ENST00000542355 CEP41Q9BYV8 373 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 CENPHQ9H3R5 247 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 CATSPERBQ9H7T0 1116 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 ETNK1Q9HBU6 452 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 SAYSD1Q9NPB0 183 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 TRPM5Q9NZQ8 1165 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 MPP6Q9NZW5 540 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 VPS18Q9P253 973 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 DNMT3LQ9UJW3 386 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 VANGL2Q9ULK5 521 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 NEU3Q9UQ49 428 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 SSX2IPQ9Y2D8 614 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 KCNK1O00180 336 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 NCAM2O15394 837 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 TTC4O95801 387 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 NUDT17P0C025 328 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 MX2P20592 715 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 CTNNB1P35222 781 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 BMPR1AP36894 532 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 MAGEA4P43358 317 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 EPHB3P54753 998 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 GYS2P54840 703 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 ERVFC1P60507 584 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 CREMQ03060 361 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 AUHQ13825 339 aaKnown RBP11.33□□□□□ -0.6
SCG3-202ENST00000542355 HIF1AQ16665 826 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 ANKRD20A2Q5SQ80 823 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 HECTD3Q5T447 861 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 ARTNQ5T4W7 220 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 ANKRD20A1Q5TYW2 823 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 MANEALQ5VSG8 457 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 ANKRD20A3Q5VUR7 823 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 SNX30Q5VWJ9 437 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 CENPUQ71F23 418 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 GPR65Q8IYL9 337 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 DEPDC1BQ8WUY9 529 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 OVCA2Q8WZ82 227 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 CDK5RAP1Q96SZ6 601 aaKnown RBP11.33□□□□□ -0.6
SCG3-202ENST00000542355 TCF25Q9BQ70 676 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 FERMT1Q9BQL6 677 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 KLC2Q9H0B6 622 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 INSL5Q9Y5Q6 135 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 RAD54BQ9Y620 910 aa11.33□□□□□ -0.6
SCG3-202ENST00000542355 GOLGA6L10A6NI86 522 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 CHADO15335 359 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 FGF10O15520 208 aaPredicted RBP11.32□□□□□ -0.6
SCG3-202ENST00000542355 COCHO43405 550 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 IGLV3-27P01718 113 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 APRTP07741 180 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 MYZAPP0CAP1 466 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 HOXC13P31276 330 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 HTR7P34969 479 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 KCNQ1P51787 676 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 EIF3BP55884 814 aaKnown RBP11.32□□□□□ -0.6
SCG3-202ENST00000542355 GALNT2Q10471 571 aa11.32□□□□□ -0.6
SCG3-202ENST00000542355 PDIA2Q13087 525 aaKnown RBP11.32□□□□□ -0.6
SCG3-202ENST00000542355 FNBP1LQ5T0N5 605 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms