RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 ESRRAP11474 423 aaPredicted RBP17.66■□□□□ 0.42
SPIDR-227ENST00000541342 SP100P23497 879 aaPredicted RBP17.66■□□□□ 0.42
SPIDR-227ENST00000541342 ROR1Q01973 937 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 OR52E8Q6IFG1 317 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 MCUR1Q96AQ8 359 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 PGBD4Q96DM1 585 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 IFT43Q96FT9 208 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 C20orf27Q9GZN8 174 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 UGT1A7Q9HAW7 530 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 UGT1A10Q9HAW8 530 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 UGT1A8Q9HAW9 530 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 PNPLA8Q9NP80 782 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 ITGB1P05556 798 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 TEX44Q53QW1 395 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 BOLA3Q53S33 107 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 VPS52Q8N1B4 723 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 TEKT4Q8WW24 435 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 CFAP36Q96G28 342 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 TRIM56Q9BRZ2 755 aaKnown RBP17.66■□□□□ 0.42
SPIDR-227ENST00000541342 POPDC2Q9HBU9 364 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 STARD7Q9NQZ5 370 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 LRCH1Q9Y2L9 728 aa17.66■□□□□ 0.42
SPIDR-227ENST00000541342 B4GALT3O60512 393 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 RFPL1O75677 317 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 BST1Q10588 318 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 CBLBQ13191 982 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 CCDC6Q16204 474 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 SLC26A11Q86WA9 606 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 SLAIN1Q8ND83 568 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 KCTD13Q8WZ19 329 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 TBCBQ99426 244 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 SMOQ99835 787 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 PCDH18Q9HCL0 1135 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 RGS18Q9NS28 235 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 PLLPQ9Y342 182 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 IKBKGQ9Y6K9 419 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 DARS2Q6PI48 645 aaKnown RBP17.65■□□□□ 0.42
SPIDR-227ENST00000541342 FAM35AQ86V20 835 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 CAND1Q86VP6 1230 aaKnown RBP17.65■□□□□ 0.42
SPIDR-227ENST00000541342 ZMIZ2Q8NF64 920 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 RNF157Q96PX1 679 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 KCNK16Q96T55 309 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 PIDD1Q9HB75 910 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 PLA2G4CQ9UP65 541 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 MDM4O15151 490 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 CHADO15335 359 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 FAM200BP0CF97 657 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 GRK4P32298 578 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 TUSC3Q13454 348 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 THOC5Q13769 683 aaKnown RBP17.65■□□□□ 0.42
SPIDR-227ENST00000541342 KRT81Q14533 505 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 THEMIS2Q5TEJ8 643 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 IRGCQ6NXR0 463 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 RFX8Q6ZV50 586 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 GPRIN1Q7Z2K8 1008 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 PPM1NQ8N819 430 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 RHOBTB2Q9BYZ6 727 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP17.65■□□□□ 0.42
SPIDR-227ENST00000541342 DLGAP2Q9P1A6 1054 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 CDH9Q9ULB4 789 aa17.65■□□□□ 0.42
SPIDR-227ENST00000541342 HMX2A2RU54 273 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 C9IYK1 514 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 COPEO14579 308 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 STIP1P31948 543 aaKnown RBP17.64■□□□□ 0.41
SPIDR-227ENST00000541342 RAP1GDS1P52306 607 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 PITX1P78337 314 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-227ENST00000541342 RCN2Q14257 317 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 PDK2Q15119 407 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 EFHC1Q5JVL4 640 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 TTC39BQ5VTQ0 682 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-227ENST00000541342 OTUD1Q5VV17 481 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-227ENST00000541342 DEFB106AQ8N104 65 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 PQLC3Q8N755 202 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 RBM15BQ8NDT2 890 aaKnown RBP17.64■□□□□ 0.41
SPIDR-227ENST00000541342 SPDYE1Q8NFV5 336 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-227ENST00000541342 LRRN4Q8WUT4 740 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 RAB6BQ9NRW1 208 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.64■□□□□ 0.41
SPIDR-227ENST00000541342 PTCH2Q9Y6C5 1203 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 FKTNO75072 461 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 SKIP12755 728 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 MATKP42679 507 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 AP1B1Q10567 949 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 FAXCQ5TGI0 409 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 FOXB2Q5VYV0 432 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 CCDC185Q8N715 623 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 FAF2Q96CS3 445 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 C7orf26Q96N11 449 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 KCNK4Q9NYG8 393 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 SIRPGQ9P1W8 387 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 ZNF638Q14966 1978 aaKnown RBP17.64■□□□□ 0.41
SPIDR-227ENST00000541342 H3BRJ5 948 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 AP1G2O75843 785 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 ODC1P11926 461 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 NEFHP12036 1026 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 PGM1P36871 562 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 BMPR2Q13873 1038 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 HFE2Q6ZVN8 426 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 CLPTM1LQ96KA5 538 aa17.64■□□□□ 0.41
SPIDR-227ENST00000541342 INPPL1O15357 1258 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms