RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 LRRC40Q9H9A6 602 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 TXLNGQ9NUQ3 528 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 CD274Q9NZQ7 290 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 PHTF1Q9UMS5 762 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 SMG5Q9UPR3 1016 aaKnown RBP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 PKP3Q9Y446 797 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 MYH6P13533 1939 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 A0A1W2PPM1 405 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 TLL1O43897 1013 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 CXCL14O95715 111 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 CHEK2O96017 543 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 ADRA1BP35368 520 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 GRAMD1BQ3KR37 738 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 RABGAP1LQ5R372 815 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 VARS2Q5ST30 1063 aaKnown RBP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 AGBL2Q5U5Z8 902 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 DCAF12L1Q5VU92 463 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 BBS12Q6ZW61 710 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 LDB1Q86U70 411 aaPredicted RBP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 ZNF280BQ86YH2 543 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 ARHGAP18Q8N392 663 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 CAVIN3Q969G5 261 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 PAWRQ96IZ0 340 aaKnown RBP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 MS4A4AQ96JQ5 239 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 CSPG4P5Q96PW8 444 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 NDNQ99608 321 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 DDX50Q9BQ39 737 aaKnown RBP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 TTPALQ9BTX7 342 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 SCUBE2Q9NQ36 999 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 V9GYQ6 96 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 F8W810 466 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 SPECC1L-ADORA2AF8WAN1 911 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 KIF3CO14782 793 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 DCTN3O75935 186 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 SRP72O76094 671 aaKnown RBP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 GUCA1CO95843 209 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 CKBP12277 381 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 CREB1P16220 341 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 TFE3P19532 575 aaPredicted RBP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 GABRR2P28476 465 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 FDFT1P37268 417 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 PITX1P78337 314 aaPredicted RBP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 ITGA9Q13797 1035 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 C6orf10Q5SRN2 563 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 C1orf146Q5VVC0 180 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 POLNQ7Z5Q5 900 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 SLC26A11Q86WA9 606 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 ING5Q8WYH8 240 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 FBXL18Q96ME1 805 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 ROPN1BQ9BZX4 212 aaPredicted RBP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 ROPN1Q9HAT0 212 aaPredicted RBP9.78□□□□□ -0.84
TTC39C-203ENST00000540918 GKN1Q9NS71 199 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 DNAJB4Q9UDY4 337 aa9.78□□□□□ -0.84
TTC39C-203ENST00000540918 MFSD11O43934 449 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 MYL2P10916 166 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 PPARGP37231 505 aaPredicted RBP9.77□□□□□ -0.84
TTC39C-203ENST00000540918 OLIG2Q13516 323 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 FBXO48Q5FWF7 155 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 CERCAMQ5T4B2 595 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 ACAD11Q709F0 780 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 MFN1Q8IWA4 741 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 LMO3Q8TAP4 145 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 LRGUKQ96M69 825 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 TMEM209Q96SK2 561 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 OMDQ99983 421 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.77□□□□□ -0.84
TTC39C-203ENST00000540918 SLCO1B3Q9NPD5 702 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 GRID1Q9ULK0 1009 aa9.77□□□□□ -0.84
TTC39C-203ENST00000540918 XPO1O14980 1071 aaKnown RBP9.77□□□□□ -0.85
TTC39C-203ENST00000540918 MEFVO15553 781 aaPredicted RBP9.77□□□□□ -0.85
TTC39C-203ENST00000540918 ATG7O95352 703 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 SERPINF2P08697 491 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 CTPS1P17812 591 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 TUFMP49411 452 aaKnown RBP9.77□□□□□ -0.85
TTC39C-203ENST00000540918 USP41Q3LFD5 358 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 SLC45A4Q5BKX6 768 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 ZDHHC17Q8IUH5 632 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 PLD5Q8N7P1 536 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 SGSM3Q96HU1 749 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 SEMA3CQ99985 751 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 GPAMQ9HCL2 828 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 KCND1Q9NSA2 647 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 HEY2Q9UBP5 337 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 ADAM28Q9UKQ2 775 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 ARL2BPQ9Y2Y0 163 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 KPNA3O00505 521 aaPredicted RBP9.77□□□□□ -0.85
TTC39C-203ENST00000540918 MTSS1O43312 755 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 FAM107AO95990 144 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 MT-CYBP00156 380 aaPredicted RBP9.77□□□□□ -0.85
TTC39C-203ENST00000540918 CYP1A1P04798 512 aaPredicted RBP9.77□□□□□ -0.85
TTC39C-203ENST00000540918 CCNB1P14635 433 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 RPA3P35244 121 aaPredicted RBP9.77□□□□□ -0.85
TTC39C-203ENST00000540918 ABL2P42684 1182 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 GEMP55040 296 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 GAD2Q05329 585 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 PTK6Q13882 451 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 GALNT3Q14435 633 aa9.77□□□□□ -0.85
TTC39C-203ENST00000540918 TSNAXIP1Q2TAA8 658 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms