RNA–Protein interactions for RNA: ENST00000540475.5

SEMA4D-223, Transcript of semaphorin 4D, human

TSL 3

Gene SEMA4D, Length 826 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SEMA4D-223	ENST00000540475	HSF2BP	O75031	334 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SRPRA	P08240	638 aa	Known RBP	13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ACADM	P11310	421 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CD59	P13987	128 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	MAOB	P27338	520 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CDH5	P33151	784 aa	Predicted RBP	13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CSK	P41240	450 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	MAPK8	P45983	427 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	MTIF2	P46199	727 aa	Known RBP	13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	VASP	P50552	380 aa	Predicted RBP	13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PLK1	P53350	603 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PITX1	P78337	314 aa	Predicted RBP	13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	MTA1	Q13330	715 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SLC12A1	Q13621	1099 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	HNRNPA1L2	Q32P51	320 aa	Known RBP	13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	UAP1L1	Q3KQV9	507 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PLEKHG6	Q3KR16	790 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	C5orf22	Q49AR2	442 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ZC3H12A	Q5D1E8	599 aa	Known RBP	13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	DCAF12L1	Q5VU92	463 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	RGL4	Q8IZJ4	473 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	MINDY1	Q8N5J2	469 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	DEFB124	Q8NES8	71 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	TUBGCP2	Q9BSJ2	902 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	NAA15	Q9BXJ9	866 aa	Known RBP	13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	KIAA1522	Q9P206	1035 aa	Predicted RBP	13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	STIM2	Q9P246	746 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	DNAJC12	Q9UKB3	198 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SCML1	Q9UN30	329 aa		13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	TP53BP1	Q12888	1972 aa	Predicted RBP	13.57	□□□□□ -0.24
SEMA4D-223	ENST00000540475	TARSL2	A2RTX5	802 aa	Known RBP	13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ZZEF1	O43149	2961 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	OPHN1	O60890	802 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	APOE	P02649	317 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ZNF883	P0CG24	379 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SLC2A3	P11169	496 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	TACR2	P21452	398 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ACSL1	P33121	698 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ATXN3	P54252	364 aa	Predicted RBP	13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	BPIFB4	P59827	614 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ZNF252P-AS1	Q0IIN9	211 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	HNRNPD	Q14103	355 aa	Known RBP	13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PITRM1	Q5JRX3	1037 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	TTC39B	Q5VTQ0	682 aa	Predicted RBP	13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	OLFML1	Q6UWY5	402 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	DBX2	Q6ZNG2	339 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	C11orf57	Q6ZUT1	292 aa	Predicted RBP	13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	USP30	Q70CQ3	517 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SLC26A9	Q7LBE3	791 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SLC47A2	Q86VL8	602 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ZDHHC17	Q8IUH5	632 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CREBRF	Q8IUR6	639 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	DEFB106A	Q8N104	65 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CFAP52	Q8N1V2	620 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	HDDC3	Q8N4P3	179 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ZNF366	Q8N895	744 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ATP6V0D2	Q8N8Y2	350 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	NT5C3B	Q969T7	300 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	NOX5	Q96PH1	765 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SLC32A1	Q9H598	525 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SGK2	Q9HBY8	427 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	DACH1	Q9UI36	760 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ERVW-1	Q9UQF0	538 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PLXNA2	O75051	1894 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CFAP47	Q6ZTR5	3102 aa		13.56	□□□□□ -0.24
SEMA4D-223	ENST00000540475	KNL1	Q8NG31	2342 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	FAM221B	A6H8Z2	402 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	BCAT2	O15382	392 aa	Predicted RBP	13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ERBB2	P04626	1255 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CCR1	P32246	355 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	NOS2	P35228	1153 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	USP8	P40818	1118 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	GABRB2	P47870	512 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SNX16	P57768	344 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CDK17	Q00537	523 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	BNC1	Q01954	994 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SLC6A3	Q01959	620 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	GRIK2	Q13002	908 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CDH18	Q13634	790 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	TPD52L1	Q16890	204 aa	Predicted RBP	13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PTPN20	Q4JDL3	420 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	C9orf64	Q5T6V5	341 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	KLHDC7A	Q5VTJ3	777 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	RAP1GAP2	Q684P5	730 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	MMS22L	Q6ZRQ5	1243 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	FAM183BP	Q6ZVS7	135 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	LGI2	Q8N0V4	545 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	CARNMT1	Q8N4J0	409 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	C1orf131	Q8NDD1	294 aa	Known RBP	13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ALG14	Q96F25	216 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	PGAP3	Q96FM1	320 aa	Predicted RBP	13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ORAI3	Q9BRQ5	295 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	GTPBP2	Q9BX10	602 aa	Known RBP	13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	NUP62CL	Q9H1M0	184 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	LMBRD1	Q9NUN5	540 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	TMEM51	Q9NW97	253 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	RRN3	Q9NYV6	651 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	SLC12A6	Q9UHW9	1150 aa		13.55	□□□□□ -0.24
SEMA4D-223	ENST00000540475	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	13.55	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms