RNA–Protein interactions for RNA: ENST00000540230.5

UBE3B-212, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,541 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-212ENST00000540230 SH3PXD2AQ5TCZ1 1133 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 SDE2Q6IQ49 451 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 MON1BQ7L1V2 547 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 DNAAF5Q86Y56 855 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 PHF13Q86YI8 300 aaPredicted RBP15.58■□□□□ 0.08
UBE3B-212ENST00000540230 AHI1Q8N157 1196 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 PGBD3Q8N328 593 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 UCMAQ8WVF2 138 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 TKTL2Q9H0I9 626 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 RRN3Q9NYV6 651 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 ADAM22Q9P0K1 906 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 SLC12A6Q9UHW9 1150 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 VANGL2Q9ULK5 521 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 MYO6Q9UM54 1294 aa15.58■□□□□ 0.08
UBE3B-212ENST00000540230 TYW5A2RUC4 315 aaKnown RBP15.57■□□□□ 0.08
UBE3B-212ENST00000540230 GOLGA6L19H0YKK7 550 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 RETP07949 1114 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 UBASH3AP57075 661 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 TPM4P67936 248 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 ATP11AP98196 1134 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 CDH18Q13634 790 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 AUHQ13825 339 aaKnown RBP15.57■□□□□ 0.08
UBE3B-212ENST00000540230 NFKBIBQ15653 356 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 CCDC6Q16204 474 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 C15orf59Q2T9L4 293 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-212ENST00000540230 MAP7D1Q3KQU3 841 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 USP39Q53GS9 565 aaKnown RBP15.57■□□□□ 0.08
UBE3B-212ENST00000540230 ARTNQ5T4W7 220 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 CCAR2Q8N163 923 aaKnown RBP15.57■□□□□ 0.08
UBE3B-212ENST00000540230 OR52K2Q8NGK3 314 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 RXFP2Q8WXD0 754 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 MYO19Q96H55 970 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 ZC3H10Q96K80 434 aaKnown RBP15.57■□□□□ 0.08
UBE3B-212ENST00000540230 MRGPRX1Q96LB2 322 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 MKRN2Q9H000 416 aaKnown RBP15.57■□□□□ 0.08
UBE3B-212ENST00000540230 SIK2Q9H0K1 926 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 WDCPQ9H6R7 721 aa15.57■□□□□ 0.08
UBE3B-212ENST00000540230 MBD1Q9UIS9 605 aaPredicted RBP15.57■□□□□ 0.08
UBE3B-212ENST00000540230 TCRBV5S1A1TA0A578 114 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 C2CD4BA6NLJ0 364 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 H0Y626 953 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 CAVIN2O95810 425 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 CSKP41240 450 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 CTSOP43234 321 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-212ENST00000540230 GSCP56915 257 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-212ENST00000540230 ASIC2Q16515 512 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 CDO1Q16878 200 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 CCDC14Q49A88 953 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 BRMS1LQ5PSV4 323 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 CXorf57Q6NSI4 855 aaKnown RBP15.56■□□□□ 0.08
UBE3B-212ENST00000540230 SERPINA13PQ6UXR4 307 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 ARCQ7LC44 396 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 ZNF571Q7Z3V5 609 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-212ENST00000540230 FAM131BQ86XD5 332 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 ZNF683Q8IZ20 524 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 APCDD1Q8J025 514 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 RPRD1AQ96P16 312 aaPredicted RBP15.56■□□□□ 0.08
UBE3B-212ENST00000540230 ARRDC1-AS1Q9H2J1 176 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 TMEM245Q9H330 911 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 HAUS4Q9H6D7 363 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 IFNKQ9P0W0 207 aa15.56■□□□□ 0.08
UBE3B-212ENST00000540230 TIMM44O43615 452 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 EPN2O95208 641 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 EPHX1P07099 455 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 DLDP09622 509 aaKnown RBP15.55■□□□□ 0.08
UBE3B-212ENST00000540230 RDXP35241 583 aaKnown RBP15.55■□□□□ 0.08
UBE3B-212ENST00000540230 RFC1P35251 1148 aaPredicted RBP15.55■□□□□ 0.08
UBE3B-212ENST00000540230 COPAP53621 1224 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 FNDC3BQ53EP0 1204 aaKnown RBP15.55■□□□□ 0.08
UBE3B-212ENST00000540230 PITRM1Q5JRX3 1037 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 PMS2CLQ68D20 193 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 CACUL1Q86Y37 369 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 TTC17Q96AE7 1141 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 SMOC1Q9H4F8 434 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 MTG2Q9H4K7 406 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 AIPL1Q9NZN9 384 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 NUP205Q92621 2012 aa15.55■□□□□ 0.08
UBE3B-212ENST00000540230 TNRC6BQ9UPQ9 1833 aaKnown RBP15.55■□□□□ 0.08
UBE3B-212ENST00000540230 A0A1B0GVM2 712 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 TCAF2A6NFQ2 919 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 TMCO5BA8MYB1 307 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 NPC1O15118 1278 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 CNTN5O94779 1100 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 ENDOD1O94919 500 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 F9P00740 461 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 CALB1P05937 261 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 SKILP12757 684 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 PDGFRAP16234 1089 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 POLR2EP19388 210 aaKnown RBP15.54■□□□□ 0.08
UBE3B-212ENST00000540230 TNFAIP3P21580 790 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 MZF1P28698 734 aaPredicted RBP15.54■□□□□ 0.08
UBE3B-212ENST00000540230 PRKCIP41743 596 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 STARD3Q14849 445 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 PLEKHG6Q3KR16 790 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 ALFQ53S48 1182 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 FIGNQ5HY92 759 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 RABGAP1LQ5R372 815 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 SFMBT2Q5VUG0 894 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 ACAD10Q6JQN1 1059 aa15.54■□□□□ 0.08
UBE3B-212ENST00000540230 WDR59Q6PJI9 974 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms