RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 HBS1LQ9Y450 684 aaKnown RBP17.39■□□□□ 0.37
COPS3-212ENST00000539941 MFHAS1Q9Y4C4 1052 aa17.39■□□□□ 0.37
COPS3-212ENST00000539941 PRRG1O14668 218 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 TEX28O15482 410 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 TLR5O60602 858 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 STK10O94804 968 aaKnown RBP17.38■□□□□ 0.37
COPS3-212ENST00000539941 IGLV3-27P01718 113 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 NUDT17P0C025 328 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 ATP2A2P16615 1042 aaKnown RBP17.38■□□□□ 0.37
COPS3-212ENST00000539941 HMGA1P17096 107 aaKnown RBP17.38■□□□□ 0.37
COPS3-212ENST00000539941 MX2P20592 715 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 CHKAP35790 457 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 PLD1Q13393 1074 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 DENND2CQ68D51 928 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 CCDC25Q86WR0 208 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 NAT8LQ8N9F0 302 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 HTR3CQ8WXA8 447 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 CPT1BQ92523 772 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 PRCCQ92733 491 aaPredicted RBP17.38■□□□□ 0.37
COPS3-212ENST00000539941 TBC1D31Q96DN5 1066 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 CABS1Q96KC9 395 aa17.38■□□□□ 0.37
COPS3-212ENST00000539941 TLL1O43897 1013 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 RNF40O75150 1001 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 MAP3K6O95382 1288 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 SYF2O95926 243 aaKnown RBP17.37■□□□□ 0.37
COPS3-212ENST00000539941 DNAJB2P25686 324 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 TUBP50607 506 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 MLLT6P55198 1093 aaPredicted RBP17.37■□□□□ 0.37
COPS3-212ENST00000539941 LZTR1Q8N653 840 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 KLHL23Q8NBE8 558 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 AUTS2Q8WXX7 1259 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 BTN2A3PQ96KV6 586 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 SIK2Q9H0K1 926 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 EPB41L4BQ9H329 900 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 UXTQ9UBK9 157 aaPredicted RBP17.37■□□□□ 0.37
COPS3-212ENST00000539941 NEU3Q9UQ49 428 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 SNX10Q9Y5X0 201 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 NFS1Q9Y697 457 aa17.37■□□□□ 0.37
COPS3-212ENST00000539941 ZNF840PA6NDX5 716 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 CHADO15335 359 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 MTSS1O43312 755 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 MAGEA6P43360 314 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 EPHB3P54753 998 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 ZNF33AQ06730 810 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 TAF12Q16514 161 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 ZNF512Q96ME7 567 aaPredicted RBP17.36■□□□□ 0.37
COPS3-212ENST00000539941 FRMD8Q9BZ67 464 aaPredicted RBP17.36■□□□□ 0.37
COPS3-212ENST00000539941 KLC2Q9H0B6 622 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 CDC42EP4Q9H3Q1 356 aaKnown RBP17.36■□□□□ 0.37
COPS3-212ENST00000539941 SEMA4AQ9H3S1 761 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 PRDM12Q9H4Q4 367 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 TRPM5Q9NZQ8 1165 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 DNMT3LQ9UJW3 386 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 INSL5Q9Y5Q6 135 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 IRAK3Q9Y616 596 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 HS3ST4Q9Y661 456 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 SLC12A8A0AV02 714 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 GOLGA8KD6RF30 607 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 EIF3HO15372 352 aaKnown RBP eCLIP17.36■□□□□ 0.37
COPS3-212ENST00000539941 RIPK2O43353 540 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 TBX18O95935 607 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 ATP5C1P36542 298 aaKnown RBP17.36■□□□□ 0.37
COPS3-212ENST00000539941 BMPR1AP36894 532 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 BASP1P80723 227 aaKnown RBP17.36■□□□□ 0.37
COPS3-212ENST00000539941 PPIDQ08752 370 aaKnown RBP17.36■□□□□ 0.37
COPS3-212ENST00000539941 GALNT2Q10471 571 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 SHHQ15465 462 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 HECTD3Q5T447 861 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 NUGGCQ68CJ6 796 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 PPP1R21Q6ZMI0 780 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 MICALCLQ6ZW33 695 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 CROCCP2Q86T23 111 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 ITIH5Q86UX2 942 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 HDAC11Q96DB2 347 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 RBM15Q96T37 977 aaKnown RBP eCLIP17.36■□□□□ 0.37
COPS3-212ENST00000539941 CCSER2Q9H7U1 834 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 ASB3Q9Y575 518 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 FAM169AQ9Y6X4 670 aa17.36■□□□□ 0.37
COPS3-212ENST00000539941 A0A0A0MRY4 1105 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 WASH4PA8MWX3 477 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 E9PAM4 449 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 CHUKO15111 745 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 OPHN1O60890 802 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 MOCS2O96007 188 aaPredicted RBP17.35■□□□□ 0.37
COPS3-212ENST00000539941 ADH1AP07327 375 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 CNPP09543 421 aaKnown RBP17.35■□□□□ 0.37
COPS3-212ENST00000539941 SRGAP2BP0DMP2 458 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 VAV1P15498 845 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 COG7P83436 770 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 TWF1Q12792 350 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 CBLBQ13191 982 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 KCNJ11Q14654 390 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 C9orf50Q5SZB4 431 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 PIK3R6Q5UE93 754 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 GPR153Q6NV75 609 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 RWDD4Q6NW29 188 aaKnown RBP17.35■□□□□ 0.37
COPS3-212ENST00000539941 CENPUQ71F23 418 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 NPWQ8N729 165 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 FAM76AQ8TAV0 307 aa17.35■□□□□ 0.37
COPS3-212ENST00000539941 PSMG2Q969U7 264 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms