RNA–Protein interactions for RNA: ENST00000539847.1

CCDC60-204, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene CCDC60, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-204ENST00000539847 KIAA1217Q5T5P2 1943 aa7.91□□□□□ -1.14
CCDC60-204ENST00000539847 PTPRZ1P23471 2315 aaPredicted RBP7.91□□□□□ -1.14
CCDC60-204ENST00000539847 TECTAO75443 2155 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 NRCAMQ92823 1304 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.9□□□□□ -1.14
CCDC60-204ENST00000539847 CFAP69A5D8W1 941 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 POC1B-GALNT4F8VUJ3 575 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 SPECC1L-ADORA2AF8WAN1 911 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 H0Y3Z8 333 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 NOP56O00567 594 aaKnown RBP7.9□□□□□ -1.14
CCDC60-204ENST00000539847 FCHO1O14526 889 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 TRDMT1O14717 391 aaKnown RBP7.9□□□□□ -1.14
CCDC60-204ENST00000539847 CASQ2O14958 399 aaPredicted RBP7.9□□□□□ -1.14
CCDC60-204ENST00000539847 BIRC5O15392 142 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 MICAL2O94851 1124 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 KLHL2O95198 593 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 MT-ND3P03897 115 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 LGALS2P05162 132 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 LINC00271P0C7V0 271 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 POLR2MP0CAP2 368 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 CCDC166P0CW27 439 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 KRT4P19013 534 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 LTBRP36941 435 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 NCKAP1LP55160 1127 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 ZNF200P98182 395 aaPredicted RBP7.9□□□□□ -1.14
CCDC60-204ENST00000539847 CYP4A11Q02928 519 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 OASLQ15646 514 aaKnown RBP7.9□□□□□ -1.14
CCDC60-204ENST00000539847 CEP55Q53EZ4 464 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 HSP90AA5PQ58FG0 334 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 RFWD3Q6PCD5 774 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 MON1BQ7L1V2 547 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 GSTA5Q7RTV2 222 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 ERMP1Q7Z2K6 904 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 RSPH3Q86UC2 560 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 ZC3H18Q86VM9 953 aaKnown RBP7.9□□□□□ -1.14
CCDC60-204ENST00000539847 SCUBE1Q8IWY4 988 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 PPIL6Q8IXY8 311 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 PPM1KQ8N3J5 372 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 FIBCD1Q8N539 461 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 SLC35B2Q8TB61 432 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 ATG4AQ8WYN0 398 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 GPRASP2Q96D09 838 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 HSH2DQ96JZ2 352 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 CYTH2Q99418 400 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 TEKT3Q9BXF9 490 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 WWP1Q9H0M0 922 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 IRF2BPLQ9H1B7 796 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 RNPEPQ9H4A4 650 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 DHX33Q9H6R0 707 aaKnown RBP7.9□□□□□ -1.14
CCDC60-204ENST00000539847 VPS37BQ9H9H4 285 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 RC3H2Q9HBD1 1191 aaKnown RBP7.9□□□□□ -1.14
CCDC60-204ENST00000539847 NPHS2Q9NP85 383 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 PARVAQ9NVD7 372 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 NDE1Q9NXR1 346 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 TAGLN3Q9UI15 199 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 ZNF180Q9UJW8 692 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 PLA2G4CQ9UP65 541 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 SQORQ9Y6N5 450 aa7.9□□□□□ -1.14
CCDC60-204ENST00000539847 RIF1Q5UIP0 2472 aaKnown RBP7.89□□□□□ -1.15
CCDC60-204ENST00000539847 TTC36A6NLP5 189 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 B2RBV5 119 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 SPATA31C2B4DYI2 1134 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 H0YCG3 227 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 CAPN5O15484 640 aaPredicted RBP7.89□□□□□ -1.15
CCDC60-204ENST00000539847 CCNT2O60583 730 aaKnown RBP7.89□□□□□ -1.15
CCDC60-204ENST00000539847 GAS7O60861 476 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 WEE2P0C1S8 567 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 AOC1P19801 751 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 GARTP22102 1010 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 IRS1P35568 1242 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 NSFP46459 744 aaKnown RBP7.89□□□□□ -1.15
CCDC60-204ENST00000539847 ARSEP51690 589 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 GPX6P59796 221 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 DLG4P78352 724 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 SP2Q02086 613 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 CREB5Q02930 508 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 WASHC5Q12768 1159 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 MAMLD1Q13495 774 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 THOC5Q13769 683 aaKnown RBP7.89□□□□□ -1.15
CCDC60-204ENST00000539847 CBX2Q14781 532 aaPredicted RBP7.89□□□□□ -1.15
CCDC60-204ENST00000539847 TAZQ16635 292 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 HIF1AQ16665 826 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 BORAQ6PGQ7 559 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 C15orf39Q6ZRI6 1047 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 RINLQ6ZS11 566 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 HFE2Q6ZVN8 426 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 CYS1Q717R9 158 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 PRICKLE2Q7Z3G6 844 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 HAUS6Q7Z4H7 955 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 POLNQ7Z5Q5 900 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 JAZF1Q86VZ6 243 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 LRRC6Q86X45 466 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 LINC00528Q8N1L1 170 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 LRRC43Q8N309 656 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 NIPA2Q8N8Q9 360 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 RFWD2Q8NHY2 731 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 FEZF2Q8TBJ5 459 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 PLEKHO2Q8TD55 490 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 TCP10LQ8TDR4 215 aa7.89□□□□□ -1.15
CCDC60-204ENST00000539847 PYROXD1Q8WU10 500 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms