RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 TBC1D31Q96DN5 1066 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 CLSTN3Q9BQT9 956 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 RABEP2Q9H5N1 569 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 LGALS13Q9UHV8 139 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 RABGEF1Q9UJ41 708 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 TEX264Q9Y6I9 313 aa23.08■■□□□ 1.29
HOMER3-204ENST00000539827 OPHN1O60890 802 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 SOD2P04179 222 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 PSMB4P28070 264 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 LBX1P52954 281 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 PPIDQ08752 370 aaKnown RBP23.07■■□□□ 1.28
HOMER3-204ENST00000539827 EFTUD2Q15029 972 aaKnown RBP eCLIP23.07■■□□□ 1.282e-6■■■■■ 36.6
HOMER3-204ENST00000539827 TMED2Q15363 201 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 C10orf120Q5SQS8 335 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 ARTNQ5T4W7 220 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 MANEALQ5VSG8 457 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 ZNF534Q76KX8 674 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 PID1Q7Z2X4 250 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 NECAB2Q7Z6G3 386 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 MIB1Q86YT6 1006 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 FBF1Q8TES7 1133 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 FRMD8Q9BZ67 464 aaPredicted RBP23.07■■□□□ 1.28
HOMER3-204ENST00000539827 COMMD8Q9NX08 183 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 CLIC5Q9NZA1 410 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 NUP205Q92621 2012 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 KIAA0355O15063 1070 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 NCAM2O15394 837 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 CDH16O75309 829 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 SEC24AO95486 1093 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 HMBSP08397 361 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 MX2P20592 715 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 PTPN3P26045 913 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 GARSP41250 739 aaKnown RBP23.07■■□□□ 1.28
HOMER3-204ENST00000539827 GRIA1P42261 906 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 TUBP50607 506 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 PIK3R6Q5UE93 754 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 LRRC31Q6UY01 552 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 CFAP36Q96G28 342 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 TMEM169Q96HH4 297 aa23.07■■□□□ 1.28
HOMER3-204ENST00000539827 RC3H2Q9HBD1 1191 aaKnown RBP23.07■■□□□ 1.28
HOMER3-204ENST00000539827 KLHL8Q9P2G9 620 aaPredicted RBP23.07■■□□□ 1.28
HOMER3-204ENST00000539827 E9PAM4 449 aa23.06■■□□□ 1.28
HOMER3-204ENST00000539827 CREB1P16220 341 aa23.06■■□□□ 1.28
HOMER3-204ENST00000539827 MMP13P45452 471 aa23.06■■□□□ 1.28
HOMER3-204ENST00000539827 HDAC11Q96DB2 347 aa23.06■■□□□ 1.28
HOMER3-204ENST00000539827 EURLQ9NYK6 297 aa23.06■■□□□ 1.28
HOMER3-204ENST00000539827 SLC12A8A0AV02 714 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 PIAS1O75925 651 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 ATP5DP30049 168 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 HOXC13P31276 330 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 PSEN1P49768 467 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 PARP6Q2NL67 630 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 LEKR1Q6ZMV7 388 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 PDCD7Q8N8D1 485 aaKnown RBP23.05■■□□□ 1.28
HOMER3-204ENST00000539827 CATSPERBQ9H7T0 1116 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 CCSER2Q9H7U1 834 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 CNOT10Q9H9A5 744 aaKnown RBP23.05■■□□□ 1.28
HOMER3-204ENST00000539827 OLA1Q9NTK5 396 aaKnown RBP23.05■■□□□ 1.28
HOMER3-204ENST00000539827 MPP6Q9NZW5 540 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 MARCH2Q9P0N8 246 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 A6NNZ2 444 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 DFFAO00273 331 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 MLLT6P55198 1093 aaPredicted RBP23.05■■□□□ 1.28
HOMER3-204ENST00000539827 TRIP4Q15650 581 aaPredicted RBP23.05■■□□□ 1.28
HOMER3-204ENST00000539827 TUBB8Q3ZCM7 444 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 ARHGAP36Q6ZRI8 547 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 TAOK1Q7L7X3 1001 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 TMEM199Q8N511 208 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 MYO18AQ92614 2054 aaKnown RBP23.05■■□□□ 1.28
HOMER3-204ENST00000539827 HERC2P3Q9BVR0 1158 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 BRD8Q9H0E9 1235 aa23.05■■□□□ 1.28
HOMER3-204ENST00000539827 APOEP02649 317 aa23.04■■□□□ 1.28
HOMER3-204ENST00000539827 SLC2A3P11169 496 aa23.04■■□□□ 1.28
HOMER3-204ENST00000539827 TSHRP16473 764 aa23.04■■□□□ 1.28
HOMER3-204ENST00000539827 ATP2A2P16615 1042 aaKnown RBP23.04■■□□□ 1.28
HOMER3-204ENST00000539827 LSP1P33241 339 aa23.04■■□□□ 1.28
HOMER3-204ENST00000539827 TUFMP49411 452 aaKnown RBP23.04■■□□□ 1.28
HOMER3-204ENST00000539827 DSG1Q02413 1049 aa23.04■■□□□ 1.28
HOMER3-204ENST00000539827 ZBTB17Q13105 803 aa23.04■■□□□ 1.28
HOMER3-204ENST00000539827 PKN2Q16513 984 aaKnown RBP23.04■■□□□ 1.28
HOMER3-204ENST00000539827 OTOP2Q7RTS6 562 aa23.04■■□□□ 1.28
HOMER3-204ENST00000539827 ARHGAP12Q8IWW6 846 aa23.04■■□□□ 1.28
HOMER3-204ENST00000539827 CMTR2Q8IYT2 770 aaKnown RBP23.04■■□□□ 1.28
HOMER3-204ENST00000539827 AUTS2Q8WXX7 1259 aa23.04■■□□□ 1.28
HOMER3-204ENST00000539827 NDFIP2Q9NV92 336 aa23.04■■□□□ 1.28
HOMER3-204ENST00000539827 AFF4Q9UHB7 1163 aaKnown RBP23.04■■□□□ 1.28
HOMER3-204ENST00000539827 SHROOM3Q8TF72 1996 aa23.04■■□□□ 1.28
HOMER3-204ENST00000539827 FGF10O15520 208 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-204ENST00000539827 ZDHHC11BP0C7U3 371 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 CHN1P15882 459 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 HTR7P34969 479 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 CBLBQ13191 982 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 TDRPQ86YL5 185 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 MPP5Q8N3R9 675 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 RIBC1Q8N443 379 aaPredicted RBP23.03■■□□□ 1.28
HOMER3-204ENST00000539827 ATP6V0D2Q8N8Y2 350 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 MAML1Q92585 1016 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 XPO6Q96QU8 1125 aaKnown RBP23.03■■□□□ 1.28
HOMER3-204ENST00000539827 TTLL2Q9BWV7 592 aa23.03■■□□□ 1.28
HOMER3-204ENST00000539827 SLC39A8Q9C0K1 460 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms