RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 CRACR2AQ9BSW2 395 aa15.55■□□□□ 0.08
USB1-203ENST00000539737 FUCA2Q9BTY2 467 aa15.55■□□□□ 0.08
USB1-203ENST00000539737 DUSP16Q9BY84 665 aa15.55■□□□□ 0.08
USB1-203ENST00000539737 ABCB8Q9NUT2 735 aa15.55■□□□□ 0.08
USB1-203ENST00000539737 FANCLQ9NW38 375 aa15.55■□□□□ 0.08
USB1-203ENST00000539737 MARCH2Q9P0N8 246 aa15.55■□□□□ 0.08
USB1-203ENST00000539737 KIAA1522Q9P206 1035 aaPredicted RBP15.55■□□□□ 0.08
USB1-203ENST00000539737 APEX2Q9UBZ4 518 aa15.55■□□□□ 0.08
USB1-203ENST00000539737 SFMBT1Q9UHJ3 866 aa15.55■□□□□ 0.08
USB1-203ENST00000539737 RAI2Q9Y5P3 530 aa15.55■□□□□ 0.08
USB1-203ENST00000539737 USP3Q9Y6I4 520 aa15.55■□□□□ 0.08
USB1-203ENST00000539737 GOLGA6L7A0A1B0GV03 622 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 SMTNL1A8MU46 457 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 PIK3R2O00459 728 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 TLX3O43711 291 aaPredicted RBP15.54■□□□□ 0.08
USB1-203ENST00000539737 SEMA4FO95754 770 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 WNT1P04628 370 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 PAEPP09466 180 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 ZNF883P0CG24 379 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 OXTRP30559 389 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 YWHAGP61981 247 aaKnown RBP eCLIP15.54■□□□□ 0.08
USB1-203ENST00000539737 KRT31Q15323 416 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 PTPRNQ16849 979 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 TMEM270Q6UE05 265 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 CHST9Q7L1S5 443 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 RSRC2Q7L4I2 434 aaKnown RBP15.54■□□□□ 0.08
USB1-203ENST00000539737 RRAGAQ7L523 313 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 UCMAQ8WVF2 138 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 ULBP1Q9BZM6 244 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 EBF2Q9HAK2 575 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 PRSS16Q9NQE7 514 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 ASH1LQ9NR48 2969 aaKnown RBP15.54■□□□□ 0.08
USB1-203ENST00000539737 TAB2Q9NYJ8 693 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 HESX1Q9UBX0 185 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 KIAA1257Q9ULG3 409 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 PCDHB4Q9Y5E5 795 aa15.54■□□□□ 0.08
USB1-203ENST00000539737 CALCAP01258 141 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 PON1P27169 355 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 CD70P32970 193 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 ZNF165P49910 485 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 AFF3P51826 1226 aaKnown RBP15.53■□□□□ 0.08
USB1-203ENST00000539737 ARID5AQ03989 594 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 CAMK2GQ13555 558 aaPredicted RBP15.53■□□□□ 0.08
USB1-203ENST00000539737 NCAPHQ15003 741 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 ZSCAN23Q3MJ62 389 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 SGO2Q562F6 1265 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 FKBP15Q5T1M5 1219 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 ARHGAP17Q68EM7 881 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 RFWD3Q6PCD5 774 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 ADIPOR2Q86V24 386 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 FMNL3Q8IVF7 1028 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 CDC6Q99741 560 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 TMEM245Q9H330 911 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 SCUBE2Q9NQ36 999 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 LIMA1Q9UHB6 759 aaKnown RBP15.53■□□□□ 0.08
USB1-203ENST00000539737 STRIP2Q9ULQ0 834 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 ZNF462Q96JM2 2506 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 MYLKQ15746 1914 aa15.53■□□□□ 0.08
USB1-203ENST00000539737 EIF4E1BA6NMX2 242 aaKnown RBP15.52■□□□□ 0.08
USB1-203ENST00000539737 CYSRT1A8MQ03 144 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 BECN2A8MW95 431 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 IGHV4-34P06331 123 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 VDRP11473 427 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 CD19P15391 556 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 ZNF18P17022 549 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 SLC9A1P19634 815 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 CDK11BP21127 795 aaKnown RBP15.52■□□□□ 0.08
USB1-203ENST00000539737 CTSKP43235 329 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 TKTL1P51854 596 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 COG7P83436 770 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 SEMG2Q02383 582 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 SHBQ15464 509 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 STILQ15468 1287 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 SMAD1Q15797 465 aaKnown RBP15.52■□□□□ 0.08
USB1-203ENST00000539737 IL27RAQ6UWB1 636 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 KAT5Q92993 513 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 KREMEN1Q96MU8 473 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 UBXN6Q9BZV1 441 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 UBE2TQ9NPD8 197 aaPredicted RBP15.52■□□□□ 0.08
USB1-203ENST00000539737 CLIC5Q9NZA1 410 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 ZNF510Q9Y2H8 683 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 PCDHGB2Q9Y5G2 931 aa15.52■□□□□ 0.08
USB1-203ENST00000539737 MGAQ8IWI9 3026 aa15.52■□□□□ 0.07
USB1-203ENST00000539737 TENM4Q6N022 2769 aa15.52■□□□□ 0.07
USB1-203ENST00000539737 TNFSF14O43557 240 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 CYBBP04839 570 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 KRT5P13647 590 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 CHKAP35790 457 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 EIF2S3P41091 472 aaKnown RBP15.51■□□□□ 0.07
USB1-203ENST00000539737 CCT8P50990 548 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 ZNF132P52740 706 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 COPB1P53618 953 aaKnown RBP15.51■□□□□ 0.07
USB1-203ENST00000539737 BCAT1P54687 386 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 NFKBIBQ15653 356 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 GOLGA7BQ2TAP0 167 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 MBLAC2Q68D91 279 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 MMS22LQ6ZRQ5 1243 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 DHX40Q8IX18 779 aaKnown RBP15.51■□□□□ 0.07
USB1-203ENST00000539737 FAM217AQ8IXS0 508 aa15.51■□□□□ 0.07
USB1-203ENST00000539737 UBA3Q8TBC4 463 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms