RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 VTA1Q9NP79 307 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 CPSF2Q9P2I0 782 aaKnown RBP14.45□□□□□ -0.1
UBE3B-210ENST00000539599 SLC7A8Q9UHI5 535 aa14.45□□□□□ -0.1
UBE3B-210ENST00000539599 SDR42E2A6NKP2 422 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 FYNP06241 537 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 LINGO3P0C6S8 592 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 DARSP14868 501 aaKnown RBP14.44□□□□□ -0.1
UBE3B-210ENST00000539599 SLC1A6P48664 564 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 LILRA4P59901 499 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 TUBB3Q13509 450 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 BLMHQ13867 455 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 DGKDQ16760 1214 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 C9orf131Q5VYM1 1079 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 LPPQ93052 612 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 ZNF669Q96BR6 464 aaPredicted RBP14.44□□□□□ -0.1
UBE3B-210ENST00000539599 ZNF333Q96JL9 665 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 DDX50Q9BQ39 737 aaKnown RBP14.44□□□□□ -0.1
UBE3B-210ENST00000539599 PAAF1Q9BRP4 392 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 ZFATQ9P243 1243 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 KLHL8Q9P2G9 620 aaPredicted RBP14.44□□□□□ -0.1
UBE3B-210ENST00000539599 PLXNB2O15031 1838 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 SBF1O95248 1867 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 PLIN3O60664 434 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 BAG2O95816 211 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 USP17L7P0C7H9 530 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 EPHB1P54762 984 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 KRT72Q14CN4 511 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 SLC25A52Q3SY17 297 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 DUSP28Q4G0W2 176 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 UBXN11Q5T124 520 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 DPY19L2Q6NUT2 758 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 NAPRTQ6XQN6 538 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 LRRC74BQ6ZQY2 392 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 CLEC20AQ6ZU45 233 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 RPAINQ86UA6 219 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 ULK2Q8IYT8 1036 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 PHC3Q8NDX5 983 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 CFAP61Q8NHU2 1237 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 SORT1Q99523 831 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 ULBP1Q9BZM6 244 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 KRT82Q9NSB4 513 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 PPM1HQ9ULR3 514 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 PLA2G4CQ9UP65 541 aa14.44□□□□□ -0.1
UBE3B-210ENST00000539599 CCL15-CCL14A0A0B4J2E2 113 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 EEF2KO00418 725 aaKnown RBP14.43□□□□□ -0.1
UBE3B-210ENST00000539599 SETSIPP0DME0 302 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 ATP6V1C1P21283 382 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 TYK2P29597 1187 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 TKTL1P51854 596 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 SNX17Q15036 470 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 CCL15Q16663 113 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 HSP90AA5PQ58FG0 334 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 PHTF2Q8N3S3 785 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 SPATA6LQ8N4H0 392 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 LRRC52Q8N7C0 313 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 FBXO41Q8TF61 875 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 BRI3BPQ8WY22 251 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 STMN2Q93045 179 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 UBQLN1Q9UMX0 589 aaKnown RBP14.43□□□□□ -0.1
UBE3B-210ENST00000539599 ZBTB24O43167 697 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-210ENST00000539599 ERCC2P18074 760 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 DEUP1Q05D60 604 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 IFRD2Q12894 506 aaPredicted RBP14.43□□□□□ -0.1
UBE3B-210ENST00000539599 ZBTB17Q13105 803 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 CAPRIN2Q6IMN6 1127 aaKnown RBP14.43□□□□□ -0.1
UBE3B-210ENST00000539599 KDELC2Q7Z4H8 507 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 ZNF410Q86VK4 478 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 UNC93AQ86WB7 457 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 CRYBG2Q8N1P7 616 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 DCLK2Q8N568 766 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 PYDC1Q8WXC3 89 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 LRRC39Q96DD0 335 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 WWP1Q9H0M0 922 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 DONSONQ9NYP3 566 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 IPPQ9Y573 584 aa14.43□□□□□ -0.1
UBE3B-210ENST00000539599 GOLGA8QA0A0J9YX86 632 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 MYBPHLA2RUH7 354 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 GOLGA8OA6NCC3 632 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 SPECC1L-ADORA2AF8WAN1 911 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 GOLGA8NF8WBI6 632 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 HUS1O60921 280 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 LTFP02788 710 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 YBX3P16989 372 aaKnown RBP eCLIP14.42□□□□□ -0.1
UBE3B-210ENST00000539599 DESP17661 470 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 NCF2P19878 526 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-210ENST00000539599 EPHX2P34913 555 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 AVPR1AP37288 418 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 NR2C2P49116 596 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 TAF6P49848 677 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 CCNHP51946 323 aaPredicted RBP14.42□□□□□ -0.1
UBE3B-210ENST00000539599 ITGA7Q13683 1181 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 LRRC8BQ6P9F7 803 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 ISLR2Q6UXK2 745 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 EP400NLQ6ZTU2 488 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 SCUBE1Q8IWY4 988 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 DNAAF3Q8N9W5 541 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 SMG8Q8ND04 991 aaKnown RBP14.42□□□□□ -0.1
UBE3B-210ENST00000539599 TINF2Q9BSI4 451 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 CHRAC1Q9NRG0 131 aa14.42□□□□□ -0.1
UBE3B-210ENST00000539599 SNX15Q9NRS6 342 aa14.42□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms